RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ZNHIT2Q9UHR6 403 aa4.6□□□□□ -1.67
SDCBPP3-201ENST00000419629 FZD1Q9UP38 647 aa4.6□□□□□ -1.67
SDCBPP3-201ENST00000419629 SPO11Q9Y5K1 396 aa4.6□□□□□ -1.67
SDCBPP3-201ENST00000419629 HS3ST4Q9Y661 456 aa4.6□□□□□ -1.67
SDCBPP3-201ENST00000419629 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 GRID2IPA4D2P6 1211 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 GSG1L2A8MUP6 293 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 TOX4O94842 621 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 IL2P60568 153 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 MRPS21P82921 87 aaKnown RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 SLC6A3Q01959 620 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 TTC38Q5R3I4 469 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 LY6G5CQ5SRR4 150 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 TIGD7Q6NT04 549 aaPredicted RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 KCNV1Q6PIU1 500 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 DDX46Q7L014 1031 aaKnown RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 USP7Q93009 1102 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 ZNF764Q96H86 408 aaPredicted RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 ZNF512Q96ME7 567 aaPredicted RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 WDR92Q96MX6 357 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 MTFR1LQ9H019 292 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 EPC1Q9H2F5 836 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 RIOX1Q9H6W3 641 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 CAAP1Q9H8G2 361 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 TOMM22Q9NS69 142 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 OXSMQ9NWU1 459 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 THG1LQ9NWX6 298 aaKnown RBP4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 KCMF1Q9P0J7 381 aa4.59□□□□□ -1.67
SDCBPP3-201ENST00000419629 DAPK3O43293 454 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 ABHD16AO95870 558 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 JUNP05412 331 aaKnown RBP4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 ITGB1P05556 798 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 ATP2A2P16615 1042 aaKnown RBP4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 GNAT2P19087 354 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 CD40P25942 277 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 LSSP48449 732 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 DSG1Q02413 1049 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 DHCR24Q15392 516 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 C7orf31Q8N865 590 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 PROKR1Q8TCW9 393 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 UBE2Q2Q8WVN8 375 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 RPGRQ92834 1020 aaKnown RBP4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 DYDC2Q96IM9 177 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 MAML3Q96JK9 1138 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 HAPLN2Q9GZV7 340 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 PTGFRNQ9P2B2 879 aa4.58□□□□□ -1.68
SDCBPP3-201ENST00000419629 A0A087X0B3 334 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZNF891A8MT65 544 aaPredicted RBP4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 DVL2O14641 736 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 RECQL4O94761 1208 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 SLC9A1P19634 815 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 CNGA1P29973 690 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 PCBP1Q15365 356 aaKnown RBP eCLIP4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 RNF187Q5TA31 235 aaPredicted RBP4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 PRAMEF9Q5VWM5 478 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 SLFN12LQ6IEE8 588 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 LRRC55Q6ZSA7 311 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 PHYKPLQ8IUZ5 450 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 CMTM4Q8IZR5 234 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 NXPE1Q8N323 547 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 SMC1BQ8NDV3 1235 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 CHTF18Q8WVB6 975 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 ST8SIA2Q92186 375 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 TUBGCP5Q96RT8 1024 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 ELF4Q99607 663 aaPredicted RBP4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 SYNPO2LQ9H987 977 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 USP36Q9P275 1121 aaKnown RBP4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 SYNPO2Q9UMS6 1093 aa4.57□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZEB2O60315 1214 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 RAB11FIP3O75154 756 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 STC2O76061 302 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 FKBP9O95302 570 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 HNRNPLP14866 589 aaKnown RBP eCLIP4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 LSP1P33241 339 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 KIR2DL3P43628 341 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 MASP1P48740 699 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 NPEPPSP55786 919 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 BCAR1P56945 870 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 SPIDRQ14159 915 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 LRRC32Q14392 662 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 GPR158Q5T848 1215 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 STRIP1Q5VSL9 837 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 EGFLAMQ63HQ2 1017 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 FKBP9P1Q75LS8 142 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 BMP8AQ7Z5Y6 402 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 CXorf67Q86X51 503 aaPredicted RBP4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 THNSL2Q86YJ6 484 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 C16orf92Q96LL3 132 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 GPR101Q96P66 508 aaPredicted RBP4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 BBC3Q96PG8 261 aaPredicted RBP4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 TTC1Q99614 292 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 TOR3AQ9H497 397 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 CYP4F11Q9HBI6 524 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 POLR3BQ9NW08 1133 aaPredicted RBP4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 DNAI1Q9UI46 699 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 SORCS3Q9UPU3 1222 aa4.56□□□□□ -1.68
SDCBPP3-201ENST00000419629 FAM83GA6ND36 823 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZAR1LA6NP61 321 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms