RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 KIAA1211Q6ZU35 1233 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 ANKRD23Q86SG2 305 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 CELF5Q8N6W0 485 aaKnown RBP5.9□□□□□ -1.46
VPS13A-207ENST00000419472 C2CD4AQ8NCU7 369 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-207ENST00000419472 HDAC2Q92769 488 aaKnown RBP5.9□□□□□ -1.46
VPS13A-207ENST00000419472 DPF3Q92784 378 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 PSMG3-AS1Q96PY0 264 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 KCTD10Q9H3F6 313 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 CCDC39Q9UFE4 941 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 ARHGAP31Q2M1Z3 1444 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 ROCK1Q13464 1354 aa5.9□□□□□ -1.46
VPS13A-207ENST00000419472 C7orf72A4D263 438 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 SYNDIG1LA6NDD5 238 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 LGALS16A8MUM7 142 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 IPO5O00410 1097 aaKnown RBP5.9□□□□□ -1.47
VPS13A-207ENST00000419472 APOL1O14791 398 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 TMEM127O75204 238 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 FTLP02792 175 aaPredicted RBP5.9□□□□□ -1.47
VPS13A-207ENST00000419472 ZNF865P0CJ78 1059 aaPredicted RBP5.9□□□□□ -1.47
VPS13A-207ENST00000419472 VAV1P15498 845 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 LIFRP42702 1097 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 RAD52P43351 418 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 RCSD1Q6JBY9 416 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 FOXR1Q6PIV2 292 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 SLC30A5Q8TAD4 765 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 NRG4Q8WWG1 115 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 RAB24Q969Q5 203 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 MRGBPQ9NV56 204 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 FBXO10Q9UK96 956 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 PCOLCE2Q9UKZ9 415 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 UNC13BO14795 1591 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 CEP170BQ9Y4F5 1589 aaPredicted RBP5.9□□□□□ -1.47
VPS13A-207ENST00000419472 NLRP1Q9C000 1473 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 PTPRTO14522 1441 aa5.9□□□□□ -1.47
VPS13A-207ENST00000419472 PRR33A8MZF0 331 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 AXIN1O15169 862 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 KITP10721 976 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ALDH9A1P49189 494 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 PKDCCQ504Y2 493 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CATSPEREQ5SY80 951 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 LIN54Q6MZP7 749 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 C1orf229Q6ZS94 237 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 SESTD1Q86VW0 696 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 LYSMD2Q8IV50 215 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 RMDN3Q96TC7 470 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 MMP19Q99542 508 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 BTBD1Q9H0C5 482 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CHMP4BQ9H444 224 aaKnown RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CYP4F12Q9HCS2 524 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ATP13A2Q9NQ11 1180 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 KMT5AQ9NQR1 393 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 MAGED1Q9Y5V3 778 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ZMYM3Q14202 1370 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 A6NLC8 198 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ST8SIA5O15466 376 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 SKAP2O75563 359 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 APOL3O95236 402 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 TIAF1O95411 115 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CBX7O95931 251 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 EOMESO95936 686 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 RPN1P04843 607 aaKnown RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CTSSP25774 331 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 HSPA2P54652 639 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 SURF1Q15526 300 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 FASTKD5Q7L8L6 764 aaKnown RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 SIMC1Q8NDZ2 872 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 AUTS2Q8WXX7 1259 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 TCTN2Q96GX1 697 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 AP1M1Q9BXS5 423 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 BRD9Q9H8M2 597 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 UBN1Q9NPG3 1134 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ANKEF1Q9NU02 776 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CPNE7Q9UBL6 633 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 A2ML1A8K2U0 1454 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 GCC2Q8IWJ2 1684 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 A0A088AWK7 358 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 WTIPA6NIX2 430 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 WASH4PA8MWX3 477 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 BCRP11274 1271 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 NCAM1P13591 858 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 KRT20P35900 424 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 RGS3P49796 1198 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 SLC16A1P53985 500 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 BCAR1P56945 870 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 PAN2Q504Q3 1202 aaKnown RBP5.89□□□□□ -1.47
VPS13A-207ENST00000419472 IQCEQ6IPM2 695 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ACAD11Q709F0 780 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CEP68Q76N32 757 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 IL31RAQ8NI17 732 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 TRAPPC12Q8WVT3 735 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 PLEKHA5Q9HAU0 1116 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 ACSS2Q9NR19 701 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 SH3GLB2Q9NR46 395 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 DACT1Q9NYF0 836 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 PCDHA13Q9Y5I0 950 aa5.89□□□□□ -1.47
VPS13A-207ENST00000419472 CEP152O94986 1710 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms