RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 LRRC71Q8N4P6 559 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 XPNPEP1Q9NQW7 623 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 SAMSN1Q9NSI8 373 aaKnown RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 MYO6Q9UM54 1294 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 GDAQ9Y2T3 454 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 HIP1RO75146 1068 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 RNF40O75150 1001 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 GJB1P08034 283 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 RHOXF2BP0C7M4 288 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 CCL5P13501 91 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 HIC1Q14526 733 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 LRRC41Q15345 812 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 PTPN21Q16825 1174 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 FBXO46Q6PJ61 603 aaPredicted RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 MMS22LQ6ZRQ5 1243 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 RHOXF2Q9BQY4 288 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 UPF3AQ9H1J1 476 aaKnown RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 NRBP2Q9NSY0 501 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 SETD4Q9NVD3 440 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 PANK4Q9NVE7 773 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 LRRIQ3A6PVS8 624 aaPredicted RBP14.04□□□□□ -0.16
LINC00642-201ENST00000419459 SLC26A2P50443 739 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 TBC1D8BQ0IIM8 1120 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 STK4Q13043 487 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 COASYQ13057 564 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 MAPK7Q13164 816 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 MFSD10Q14728 455 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 EMC2Q15006 297 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 TARBP2Q15633 366 aaKnown RBP14.04□□□□□ -0.16
LINC00642-201ENST00000419459 FAM102BQ5T8I3 360 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 CYP26C1Q6V0L0 522 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 KCTD17Q8N5Z5 321 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 KLHDC9Q8NEP7 349 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 FAM167AQ96KS9 214 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 GSDMAQ96QA5 445 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 MED15Q96RN5 788 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 NIFKQ9BYG3 293 aaKnown RBP14.04□□□□□ -0.16
LINC00642-201ENST00000419459 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 SLC39A2Q9NP94 309 aa14.04□□□□□ -0.16
LINC00642-201ENST00000419459 PAK6Q9NQU5 681 aaPredicted RBP14.04□□□□□ -0.16
LINC00642-201ENST00000419459 A6NNZ2 444 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 HBP1O60381 514 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 ZNF200P98182 395 aaPredicted RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 SPAG1Q07617 926 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 PPFIA1Q13136 1202 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 TUBB8Q3ZCM7 444 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 CCSAPQ6IQ19 270 aaPredicted RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 FOXR1Q6PIV2 292 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 UNC13DQ70J99 1090 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 SFR1Q86XK3 245 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 METTL13Q8N6R0 699 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 LMBR1Q8WVP7 490 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 SLC7A3Q8WY07 619 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 RUBCNQ92622 972 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 ZNF668Q96K58 619 aaPredicted RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 DHX33Q9H6R0 707 aaKnown RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 EXOC1Q9NV70 894 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 MSCO60682 206 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 DGAT1O75907 488 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 SYF2O95926 243 aaKnown RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 MYL1P05976 194 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 SMIM10L2AP0DMW4 78 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 SMIM10L2BP0DMW5 78 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 USP8P40818 1118 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 CLCN3P51790 818 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 CASP5P51878 434 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 CKAP4Q07065 602 aaKnown RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 GRIK4Q16099 956 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 HSP90AA4PQ58FG1 418 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
LINC00642-201ENST00000419459 ZNF662Q6ZS27 426 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 RNF180Q86T96 592 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 KIAA0895Q8NCT3 520 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 ZNF333Q96JL9 665 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 PPP1R16BQ96T49 567 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 ATP6V0A4Q9HBG4 840 aa14.03□□□□□ -0.16
LINC00642-201ENST00000419459 TEX33O43247 280 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 FAM13AO94988 1023 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 GYPCP04921 128 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.16
LINC00642-201ENST00000419459 ARHGAP25P42331 645 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 RANBP2P49792 3224 aaKnown RBP14.02□□□□□ -0.16
LINC00642-201ENST00000419459 PSEN2P49810 448 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 MARCH8Q5T0T0 291 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 GBP6Q6ZN66 633 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 KSR1Q8IVT5 923 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 MYCT1Q8N699 235 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 EHBP1Q8NDI1 1231 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 COG1Q8WTW3 980 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 BSNDQ8WZ55 320 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 PDLIM7Q9NR12 457 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 HDAC6Q9UBN7 1215 aa14.02□□□□□ -0.16
LINC00642-201ENST00000419459 HPCAL4Q9UM19 191 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms