RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ZC3H15Q8WU90 426 aaKnown RBP15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 FAM167AQ96KS9 214 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 CBWD1Q9BRT8 395 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ABCB6Q9NP58 842 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 STIM2Q9P246 746 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SUCLA2Q9P2R7 463 aaPredicted RBP15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 MAFBQ9Y5Q3 323 aaPredicted RBP15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 CCDC188H7C350 402 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PDE2AO00408 941 aaPredicted RBP15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 DDX3XO00571 662 aaKnown RBP eCLIP15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SASH3O75995 380 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TRIM49P0CI25 452 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TRIM49CP0CI26 452 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GZMAP12544 262 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GPC3P51654 580 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 APBA1Q02410 837 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NNTQ13423 1086 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 CASP8Q14790 479 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ERO1BQ86YB8 467 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TPCN2Q8NHX9 752 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ACTRT1Q8TDG2 376 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 MORC4Q8TE76 937 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 COG1Q8WTW3 980 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GTF3C2Q8WUA4 911 aaPredicted RBP15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 MFSD14AQ96MC6 490 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NAP1L3Q99457 506 aaPredicted RBP15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 EPC1Q9H2F5 836 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 BCAS3Q9H6U6 928 aa15.76■□□□□ 0.11
HLA-DPA1-242ENST00000419277 DOCK5Q9H7D0 1870 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 IGKV6D-21A0A0A0MT36 114 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 A0A0G2JLL6 359 aaPredicted RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 HNRNPDLO14979 420 aaKnown RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ZNF185O15231 689 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ZNF862O60290 1169 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 STBD1O95210 358 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 KIF4AO95239 1232 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PIGRP01833 764 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 OATP04181 439 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NAMPTP43490 491 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ALDH5A1P51649 535 aaPredicted RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 EPHB4P54760 987 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 MFAP3P55082 362 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PLA2G4FQ68DD2 849 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SLFN12LQ6IEE8 588 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PPP1R2P3Q6NXS1 205 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PRRT2Q7Z6L0 340 aaPredicted RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 KSR1Q8IVT5 923 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 AFAP1L1Q8TED9 768 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SLC7A3Q8WY07 619 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 DHX38Q92620 1227 aaKnown RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NIFKQ9BYG3 293 aaKnown RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SEPT9Q9UHD8 586 aaPredicted RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TTC7AQ9ULT0 858 aaPredicted RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ZC3H4Q9UPT8 1303 aaKnown RBP15.75■□□□□ 0.11
HLA-DPA1-242ENST00000419277 UNCXA6NJT0 531 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 LDHAP00338 332 aaKnown RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TNFAIP3P21580 790 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NOP2P46087 812 aaKnown RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 AARSP49588 968 aaKnown RBP eCLIP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 HIRAP54198 1017 aaPredicted RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GCNT1Q02742 428 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 DMTNQ08495 405 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PLS1Q14651 629 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TERF2Q15554 542 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SWSAP1Q6NVH7 229 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 MAEAQ7L5Y9 396 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 CCDC60Q8IWA6 550 aaPredicted RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ANKRD13AQ8IZ07 590 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 GOLGA6L1Q8N7Z2 621 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 FBXL13Q8NEE6 735 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 FAM71BQ8TC56 605 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 POLD4Q9HCU8 107 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ZNF302Q9NR11 478 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 STYXL1Q9Y6J8 313 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 IRX3P78415 501 aaPredicted RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 STRN3Q13033 797 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PHLDB3Q6NSJ2 640 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PEX26Q7Z412 305 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 IFT20Q8IY31 132 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NLGN2Q8NFZ4 835 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NT5C1BQ96P26 610 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PACSIN1Q9BY11 444 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SPATC1LQ9H0A9 340 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TMEM117Q9H0C3 514 aa15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 DHX33Q9H6R0 707 aaKnown RBP15.74■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SYNGAP1Q96PV0 1343 aa15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SPDYE5A6NIY4 337 aa15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 MIF4GDA9UHW6 222 aaKnown RBP15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PGRMC1O00264 195 aaKnown RBP15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 TFRCP02786 760 aaKnown RBP15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 CLDN10P78369 228 aa15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 PPP3CAQ08209 521 aa15.73■□□□□ 0.11
HLA-DPA1-242ENST00000419277 EMC2Q15006 297 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms