RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 DBR1Q9UK59 544 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 BTAF1O14981 1849 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 FAM187AA6NFU0 413 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 PAEPP09466 180 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 BCRP11274 1271 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 BFSP1Q12934 665 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 DHX34Q14147 1143 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 PPP2R5EQ16537 467 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 CCDC137Q6PK04 289 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 OTUD6AQ7L8S5 288 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 OTOP1Q7RTM1 612 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 RPUSD2Q8IZ73 545 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 EPB41L4BQ9H329 900 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 CD2APQ9Y5K6 639 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 SPOPO43791 374 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 VCAM1P19320 739 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 SEL1L2Q5TEA6 688 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 ZDHHC24Q6UX98 284 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 LRRC34Q8IZ02 419 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 DYDC1Q8WWB3 177 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 MKL1Q969V6 931 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 SH2D3AQ9BRG2 576 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 GGT7Q9UJ14 662 aa16.36■□□□□ 0.21
SEMA3B-203ENST00000419007 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 COMTP21964 271 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 FAM133BQ5BKY9 247 aaKnown RBP16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 HIBCHQ6NVY1 386 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 CPNE8Q86YQ8 564 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 RHOT2Q8IXI1 618 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 PRELID2Q8N945 189 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 SGSM3Q96HU1 749 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 TCRBV7S2A1N4TA0A589 114 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 ARHGEF35A5YM69 484 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 C5orf60A6NFR6 353 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 K7ENM7 598 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 PHF2O75151 1096 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 LRRC14Q15048 493 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 TTC27Q6P3X3 843 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 HHIPL2Q6UWX4 724 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 ARHGEF19Q8IW93 802 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 KAT5Q92993 513 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 MKNK1Q9BUB5 465 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 TXLNGYQ9BZA5 131 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 WRAP73Q9P2S5 460 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-203ENST00000419007 CIITAP33076 1130 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 CCT6BQ92526 530 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 MTFR1LQ9H019 292 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 BAIAP2L1Q9UHR4 511 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 ZBTB21Q9ULJ3 1066 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 CETN1Q12798 172 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 PNMA8AQ86V59 439 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 TBC1D31Q96DN5 1066 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 DNAJC17Q9NVM6 304 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 TPX2Q9ULW0 747 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 BRWD3Q6RI45 1802 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 CHRNA3P32297 505 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 GPC5P78333 572 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 SH3BP5LQ7L8J4 393 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 TCP11Q8WWU5 503 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 ZSWIM1Q9BR11 485 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 SYT11Q9BT88 431 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 TUFT1Q9NNX1 390 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 MLXIPLQ9NP71 852 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 GRHL1Q9NZI5 618 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 FAM198AQ9UFP1 575 aa16.34■□□□□ 0.21
SEMA3B-203ENST00000419007 CCT8L1PA6NM43 557 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 RASGRF2O14827 1237 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 HGSO14964 777 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 HIP1RO75146 1068 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 NUDT17P0C025 328 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 PYGMP11217 842 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 ZDHHC14Q8IZN3 488 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 NACC1Q96RE7 527 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF577Q9BSK1 485 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 ANKRD63C9JTQ0 380 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 ACSL3O95573 720 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 CLTAP09496 248 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 PRELPP51888 382 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms