RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 FAM107AO95990 144 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PLS3P13797 630 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MFAP3P55082 362 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 KIF22Q14807 665 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 XKR9Q5GH70 373 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 KIAA1755Q5JYT7 1200 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PARP2Q9UGN5 583 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 GOLGA8IPA6NC78 632 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 GOLGA8JA6NMD2 632 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MEFVO15553 781 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 IFT88Q13099 833 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MYCBPAPQ8TBZ2 947 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CABS1Q96KC9 395 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 IGSF9BQ9UPX0 1349 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 GMNCA6NCL1 334 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 SLC16A4O15374 487 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CHRNA3P32297 505 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 GBP1P32455 592 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 DLG4P78352 724 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 AGBL2Q5U5Z8 902 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ZNF341Q9BYN7 854 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CCDC113Q9H0I3 377 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 EFCC1Q9HA90 598 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 NENFQ9UMX5 172 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 RTN2O75298 545 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ITGB5P18084 799 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 FLT3P36888 993 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PPATQ06203 517 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CALCOCO2Q13137 446 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 UAP1Q16222 522 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PALB2Q86YC2 1186 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PRPF38AQ8NAV1 312 aaKnown RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PSMD1Q99460 953 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 SELENOSQ9BQE4 189 aa12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 TISP43B9A030 160 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MYO1FO00160 1098 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PODXLO00592 558 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 EIF2AK2P19525 551 aaKnown RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ECHS1P30084 290 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PDE6CP51160 858 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PPP1R7Q15435 360 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PACS2Q86VP3 889 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 TMEM39BQ9GZU3 492 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 TBC1D22BQ9NU19 505 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ICAM1P05362 532 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 KRT5P13647 590 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 TMOD1P28289 359 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 HSPA1LP34931 641 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 RARRES1P49788 294 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MAPK7Q13164 816 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ZNF653Q96CK0 615 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CNOT10Q9H9A5 744 aaKnown RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 RGS16O15492 202 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 DDX3YO15523 660 aaKnown RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CYP26A1O43174 497 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PMS2P54278 862 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CCDC25Q86WR0 208 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ARHGEF19Q8IW93 802 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 BICD1Q96G01 975 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CHORDC1Q9UHD1 332 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PTPN22Q9Y2R2 807 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 NR2E1Q9Y466 385 aa12.6□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 EP400Q96L91 3159 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 PHF2O75151 1096 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 COMTP21964 271 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CAP2P40123 477 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CROCCP2Q86T23 111 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 DAW1Q8N136 415 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 STMN4Q9H169 189 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ADAMTSL1Q8N6G6 1762 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 NFIBO00712 420 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 TKFCQ3LXA3 575 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 CCDC137Q6PK04 289 aaKnown RBP12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 ZNF564Q8TBZ8 553 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P3Y-201ENST00000418188 MORC4Q8TE76 937 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms