RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 FILIP1Q7Z7B0 1213 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 BSNDQ8WZ55 320 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 CNOT6LQ96LI5 555 aaKnown RBP13.03□□□□□ -0.32
GABRE-202ENST00000417300 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
GABRE-202ENST00000417300 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 INTS13Q9NVM9 706 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
GABRE-202ENST00000417300 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
GABRE-202ENST00000417300 CACNA1BQ00975 2339 aa13.02□□□□□ -0.32
GABRE-202ENST00000417300 GRXCR1A8MXD5 290 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 H3BRB1 525 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 DYNC1LI2O43237 492 aaPredicted RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 MSCO60682 206 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 RAG1P15918 1043 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 CNGA1P29973 690 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 NAMPTP43490 491 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 CPT1AP50416 773 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 MARSP56192 900 aaKnown RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 KCNA1Q09470 495 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 MYBPC2Q14324 1141 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 NR1I3Q14994 352 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 IER5Q5VY09 327 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 TRPV1Q8NER1 839 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 TCP11Q8WWU5 503 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 ACCSQ96QU6 501 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 PHOX2BQ99453 314 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 GBP3Q9H0R5 595 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 RNPEPQ9H4A4 650 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
GABRE-202ENST00000417300 COG5Q9UP83 839 aa13.02□□□□□ -0.33
GABRE-202ENST00000417300 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 CETN3O15182 167 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 SLC16A4O15374 487 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 SLC16A3O15427 465 aaKnown RBP13.01□□□□□ -0.33
GABRE-202ENST00000417300 F2P00734 622 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 NR3C1P04150 777 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 ZNF286BP0CG31 522 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 GLRA2P23416 452 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 NR2F2P24468 414 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 ITGB8P26012 769 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 RPL13P26373 211 aaKnown RBP13.01□□□□□ -0.33
GABRE-202ENST00000417300 PBX1P40424 430 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 NKX3-2P78367 333 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 ADAM9Q13443 819 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 BRDTQ58F21 947 aaPredicted RBP13.01□□□□□ -0.33
GABRE-202ENST00000417300 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 ASAP3Q8TDY4 903 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 TMEM143Q96AN5 459 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 AP5M1Q9H0R1 490 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 AGPAT3Q9NRZ7 376 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 IMPACTQ9P2X3 320 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 EXOC7Q9UPT5 735 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
GABRE-202ENST00000417300 KAT6AQ92794 2004 aa13□□□□□ -0.33
GABRE-202ENST00000417300 DENND3A2RUS2 1198 aa13□□□□□ -0.33
GABRE-202ENST00000417300 LGALS16A8MUM7 142 aa13□□□□□ -0.33
GABRE-202ENST00000417300 KBTBD13C9JR72 458 aa13□□□□□ -0.33
GABRE-202ENST00000417300 N4BP3O15049 544 aa13□□□□□ -0.33
GABRE-202ENST00000417300 MAGEB2O15479 319 aa13□□□□□ -0.33
GABRE-202ENST00000417300 SEPT4O43236 478 aa13□□□□□ -0.33
GABRE-202ENST00000417300 C22orf31O95567 290 aa13□□□□□ -0.33
GABRE-202ENST00000417300 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
GABRE-202ENST00000417300 TPM2P07951 284 aa13□□□□□ -0.33
GABRE-202ENST00000417300 ALADP13716 330 aa13□□□□□ -0.33
GABRE-202ENST00000417300 INSRRP14616 1297 aa13□□□□□ -0.33
GABRE-202ENST00000417300 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
GABRE-202ENST00000417300 TLE2Q04725 743 aa13□□□□□ -0.33
GABRE-202ENST00000417300 SNX17Q15036 470 aa13□□□□□ -0.33
GABRE-202ENST00000417300 RAB30Q15771 203 aa13□□□□□ -0.33
GABRE-202ENST00000417300 MAN2A1Q16706 1144 aa13□□□□□ -0.33
GABRE-202ENST00000417300 KSR1Q8IVT5 923 aa13□□□□□ -0.33
GABRE-202ENST00000417300 LINC01465Q8N7H1 131 aa13□□□□□ -0.33
GABRE-202ENST00000417300 SPC24Q8NBT2 197 aa13□□□□□ -0.33
GABRE-202ENST00000417300 ARRDC4Q8NCT1 418 aa13□□□□□ -0.33
GABRE-202ENST00000417300 PSPC1Q8WXF1 523 aaKnown RBP13□□□□□ -0.33
GABRE-202ENST00000417300 LENG1Q96BZ8 264 aaPredicted RBP13□□□□□ -0.33
GABRE-202ENST00000417300 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
GABRE-202ENST00000417300 TUBGCP2Q9BSJ2 902 aa13□□□□□ -0.33
GABRE-202ENST00000417300 MKNK1Q9BUB5 465 aa13□□□□□ -0.33
GABRE-202ENST00000417300 UPF3AQ9H1J1 476 aaKnown RBP13□□□□□ -0.33
GABRE-202ENST00000417300 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms