RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 P3H4Q92791 437 aa13.74□□□□□ -0.21
SCAF8-203ENST00000417268 FAM213AQ9BRX8 229 aa13.74□□□□□ -0.21
SCAF8-203ENST00000417268 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
SCAF8-203ENST00000417268 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
SCAF8-203ENST00000417268 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCAF8-203ENST00000417268 ZFPM1Q8IX07 1006 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
SCAF8-203ENST00000417268 TSC22D3Q99576 134 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 HDAC6Q9UBN7 1215 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 TRIM49BA6NDI0 452 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 MAPK4P31152 587 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
SCAF8-203ENST00000417268 MTF1Q14872 753 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 MAGOHBQ96A72 148 aaKnown RBP13.73□□□□□ -0.21
SCAF8-203ENST00000417268 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 GFPT2O94808 682 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 KCNJ6P48051 423 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 KIF11P52732 1056 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 PPATQ06203 517 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 DSTYKQ6XUX3 929 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 NYAP1Q6ZVC0 841 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 GBP7Q8N8V2 638 aaPredicted RBP13.73□□□□□ -0.21
SCAF8-203ENST00000417268 RNF149Q8NC42 400 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
SCAF8-203ENST00000417268 YIPF3Q9GZM5 350 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 RGS2P41220 211 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 IL9RQ01113 521 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 GSDMBQ8TAX9 411 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 KLC4Q9NSK0 619 aa13.73□□□□□ -0.21
SCAF8-203ENST00000417268 LGALS16A8MUM7 142 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 IFNB1P01574 187 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 IFRD2Q12894 506 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 NTRK3Q16288 839 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 ARMCX2Q7L311 632 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 FAM133AQ8N9E0 248 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 CCHCR1Q8TD31 782 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 VCX3AQ9NNX9 186 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 TEX33O43247 280 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 DSG3P32926 999 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 SREBF1P36956 1147 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 KRT81Q14533 505 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 SUFUQ9UMX1 484 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 PASKQ96RG2 1323 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 MANSC4A6NHS7 340 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 EVI5O60447 810 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 CD58P19256 250 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 RFC5P40937 340 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 FAM149B1Q96BN6 582 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 IFT122Q9HBG6 1241 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 SUCLA2Q9P2R7 463 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 KIAA0391O15091 583 aaKnown RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 RARBP10826 455 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 HERVK_113P62684 666 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 KYAT1Q16773 422 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 LRRC23Q53EV4 343 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 ZNF746Q6NUN9 644 aaPredicted RBP13.72□□□□□ -0.21
SCAF8-203ENST00000417268 NLRP14Q86W24 1093 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
SCAF8-203ENST00000417268 PDXKO00764 312 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 NDC80O14777 642 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 FOXN1O15353 648 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 SERPING1P05155 500 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 PRKCEQ02156 737 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 BFSP1Q12934 665 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 PDZD4Q76G19 769 aaPredicted RBP13.71□□□□□ -0.21
SCAF8-203ENST00000417268 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
SCAF8-203ENST00000417268 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
SCAF8-203ENST00000417268 PARP9Q8IXQ6 854 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 BEST2Q8NFU1 509 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 ZNF653Q96CK0 615 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 SYT17Q9BSW7 474 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 PSD3Q9NYI0 1048 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 TOPAZ1Q8N9V7 1692 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 ATP8B3O60423 1300 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 AK9Q5TCS8 1911 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 ITIH3Q06033 890 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 KCNH2Q12809 1159 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 LGSNQ5TDP6 509 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 TRIM50Q86XT4 487 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 SPATC1LQ9H0A9 340 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 ANKEF1Q9NU02 776 aa13.71□□□□□ -0.21
SCAF8-203ENST00000417268 GCLMP48507 274 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 VAMP7P51809 220 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 SLMAPQ14BN4 828 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 HVCN1Q96D96 273 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 SPDL1Q96EA4 605 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 AP1M1Q9BXS5 423 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.22
SCAF8-203ENST00000417268 ANO9A1A5B4 782 aa13.71□□□□□ -0.22
SCAF8-203ENST00000417268 GMNCA6NCL1 334 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms