RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 BAG1Q99933 345 aaPredicted RBP18.55■□□□□ 0.56
CALD1-204ENST00000417172 AP5M1Q9H0R1 490 aa18.55■□□□□ 0.56
CALD1-204ENST00000417172 ABHD10Q9NUJ1 306 aa18.55■□□□□ 0.56
CALD1-204ENST00000417172 THSD7BQ9C0I4 1608 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 USP27XA6NNY8 438 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 H0YCG3 227 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 CSDE1O75534 798 aaKnown RBP18.54■□□□□ 0.56
CALD1-204ENST00000417172 VTNP04004 478 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 MAP2K2P36507 400 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 LIG4P49917 911 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 BFSP1Q12934 665 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 TRIM14Q14142 442 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 MXD4Q14582 209 aaPredicted RBP18.54■□□□□ 0.56
CALD1-204ENST00000417172 MTF1Q14872 753 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 BRDTQ58F21 947 aaPredicted RBP18.54■□□□□ 0.56
CALD1-204ENST00000417172 CDCA2Q69YH5 1023 aaPredicted RBP18.54■□□□□ 0.56
CALD1-204ENST00000417172 LINC01465Q8N7H1 131 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 LSM14BQ9BX40 385 aaKnown RBP18.54■□□□□ 0.56
CALD1-204ENST00000417172 CFHR5Q9BXR6 569 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 CCDC113Q9H0I3 377 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 CGNQ9P2M7 1197 aaKnown RBP18.54■□□□□ 0.56
CALD1-204ENST00000417172 CAPN11Q9UMQ6 739 aa18.54■□□□□ 0.56
CALD1-204ENST00000417172 PHLPP2Q6ZVD8 1323 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 PGK1P00558 417 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 TPM1P09493 284 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 C6orf222P0C671 652 aaPredicted RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 ACTN1P12814 892 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 CCND3P30281 292 aaPredicted RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 MYBPC2Q14324 1141 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 FSCN1Q16658 493 aaKnown RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 CBWD6Q4V339 395 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 CBWD3Q5JTY5 395 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 CBWD5Q5RIA9 395 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 CNGA4Q8IV77 575 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 LMBR1Q8WVP7 490 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 PANX2Q96RD6 677 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 MINDY3Q9H8M7 445 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 ANKFY1Q9P2R3 1169 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 COL1A2P08123 1366 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 SOWAHDA6NJG2 315 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 ZNF500O60304 480 aaPredicted RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 NOL4O94818 638 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 SLC9A1P19634 815 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 CPT1AP50416 773 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 MFSD10Q14728 455 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 SNRNP35Q16560 246 aaKnown RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 EXOC8Q8IYI6 725 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 RETREG2Q8NC44 543 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 TMEM174Q8WUU8 243 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 JPH2Q9BR39 696 aaPredicted RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 AKT3Q9Y243 479 aa18.53■□□□□ 0.56
CALD1-204ENST00000417172 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
CALD1-204ENST00000417172 GPR25O00155 361 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 MSCO60682 206 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 SNRPFP62306 86 aaKnown RBP18.52■□□□□ 0.56
CALD1-204ENST00000417172 ZBTB41Q5SVQ8 909 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 C1orf220Q5T0J3 134 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 FAM84AQ96KN4 292 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 FAM213AQ9BRX8 229 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 TMEM134Q9H6X4 195 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 SRRDQ9UH36 339 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 TSKSQ9UJT2 592 aa18.52■□□□□ 0.56
CALD1-204ENST00000417172 DUSP11O75319 330 aaKnown RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 PRKAR2AP13861 404 aaKnown RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 PSEN2P49810 448 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 NOLC1Q14978 699 aaKnown RBP eCLIP18.51■□□□□ 0.55
CALD1-204ENST00000417172 E4F1Q66K89 784 aaPredicted RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 CCDC112Q8NEF3 446 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 KCNN1Q92952 543 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 TRMT1Q9NXH9 659 aaKnown RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 KCNG1Q9UIX4 513 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 Q9Y3F1 56 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 A0A087WZ62 844 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 MAGEB2O15479 319 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 B4GALT5O43286 388 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 PRKCBP05771 671 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 HARSP12081 509 aaKnown RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 FMO5P49326 533 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 VAMP7P51809 220 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 PURAQ00577 322 aaKnown RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 PPP3CAQ08209 521 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 SEZ6Q53EL9 994 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 DPY19L2P1Q6NXN4 242 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 NEK11Q8NG66 645 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 POP1Q99575 1024 aaKnown RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 CHP1Q99653 195 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 FDXACB1Q9BRP7 624 aaPredicted RBP18.51■□□□□ 0.55
CALD1-204ENST00000417172 NUP58Q9BVL2 599 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 IFT122Q9HBG6 1241 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 NLRC4Q9NPP4 1024 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 GCNT4Q9P109 453 aa18.51■□□□□ 0.55
CALD1-204ENST00000417172 INO80B-WBP1J3KQ70 363 aa18.5■□□□□ 0.55
CALD1-204ENST00000417172 HAS3O00219 553 aa18.5■□□□□ 0.55
CALD1-204ENST00000417172 PIGRP01833 764 aa18.5■□□□□ 0.55
CALD1-204ENST00000417172 KRT13P13646 458 aa18.5■□□□□ 0.55
CALD1-204ENST00000417172 GARTP22102 1010 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms