RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 GLB1LQ6UWU2 654 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 FAM43BQ6ZT52 329 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-202ENST00000416769 GPR149Q86SP6 731 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 CABP7Q86V35 215 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 TMEM143Q96AN5 459 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 B3GALT6Q96L58 329 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 CHST12Q9NRB3 414 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 DZANK1Q9NVP4 752 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 MARCH5Q9NX47 278 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 PRG3Q9Y2Y8 225 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-202ENST00000416769 IRAK3Q9Y616 596 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 PROB1E7EW31 1015 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 ZBTB39O15060 712 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 LILRB3O75022 631 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 HOXA11P31270 313 aaPredicted RBP14.45□□□□□ -0.1
LINC00339-202ENST00000416769 NBL1P41271 181 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 USP11P51784 963 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 CLCN4P51793 760 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 EVCP57679 992 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 AKAP17AQ02040 695 aaKnown RBP14.45□□□□□ -0.1
LINC00339-202ENST00000416769 RNASELQ05823 741 aaKnown RBP14.45□□□□□ -0.1
LINC00339-202ENST00000416769 INF2Q27J81 1249 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 CCDC148Q8NFR7 591 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 BICD2Q8TD16 824 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 MBOAT7Q96N66 472 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 TRAIPQ9BWF2 469 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 CYP26B1Q9NR63 512 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 AGPAT5Q9NUQ2 364 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 VAV3Q9UKW4 847 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 PCDHA4Q9UN74 947 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 KCNJ14Q9UNX9 436 aa14.45□□□□□ -0.1
LINC00339-202ENST00000416769 ARID2Q68CP9 1835 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 RFPL2O75678 378 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 SPATA31D3P0C874 917 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 SRGAP2CP0DJJ0 459 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 KLRC2P26717 231 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-202ENST00000416769 MCTP2Q6DN12 878 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 SPATA31D4Q6ZUB0 917 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 TMEM87AQ8NBN3 555 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 SMG8Q8ND04 991 aaKnown RBP14.44□□□□□ -0.1
LINC00339-202ENST00000416769 RABGGTAQ92696 567 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 EIF2AQ9BY44 585 aaKnown RBP14.44□□□□□ -0.1
LINC00339-202ENST00000416769 SFXN1Q9H9B4 322 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 KCNK12Q9HB15 430 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 MIOSQ9NXC5 875 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 CACNG4Q9UBN1 327 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 HES2Q9Y543 173 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 COL4A3BPQ9Y5P4 624 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 GPR179Q6PRD1 2367 aa14.44□□□□□ -0.1
LINC00339-202ENST00000416769 CYP3A7-CYP3A51PA0A087WV96 503 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 NRP1O14786 923 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 ZNF623O75123 536 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 CYP3A7P24462 503 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 MCM2P49736 904 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 AK2P54819 239 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 STK3Q13188 491 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 CCDC149Q6ZUS6 474 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 BLIDQ8IZY5 108 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 SIX5Q8N196 739 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 PRPF31Q8WWY3 499 aaKnown RBP14.43□□□□□ -0.1
LINC00339-202ENST00000416769 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
LINC00339-202ENST00000416769 ZFP42Q96MM3 310 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 RSAD1Q9HA92 442 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 MAN1C1Q9NR34 630 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 DDX25Q9UHL0 483 aaKnown RBP14.43□□□□□ -0.1
LINC00339-202ENST00000416769 USTQ9Y2C2 406 aa14.43□□□□□ -0.1
LINC00339-202ENST00000416769 KRBA1A5PL33 1030 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 TEX28O15482 410 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 CFHP08603 1231 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 PSMC5P62195 406 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 LETM2Q2VYF4 491 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 EARS2Q5JPH6 523 aaKnown RBP14.42□□□□□ -0.1
LINC00339-202ENST00000416769 MRPL10Q7Z7H8 261 aaKnown RBP14.42□□□□□ -0.1
LINC00339-202ENST00000416769 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 RDM1Q8NG50 284 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 OXER1Q8TDS5 423 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 CPB2Q96IY4 423 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 MYADMQ96S97 322 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 RGL1Q9NZL6 768 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 DUSP12Q9UNI6 340 aa14.42□□□□□ -0.1
LINC00339-202ENST00000416769 WDR87Q6ZQQ6 2873 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 CACNA1IQ9P0X4 2223 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 A0A087WWV3 80 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 AOC1P19801 751 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 MLH1P40692 756 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 DNM2P50570 870 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 RAB27AP51159 221 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 CLCN5P51795 746 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 LAMTOR4Q0VGL1 99 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 TDGQ13569 410 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 CDR2LQ86X02 465 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-202ENST00000416769 GLYCTKQ8IVS8 523 aa14.41□□□□□ -0.1
LINC00339-202ENST00000416769 CCDC105Q8IYK2 499 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms