RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 RASGRF2O14827 1237 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 PDGFRBP09619 1106 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 USP11P51784 963 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 SNAPC2Q13487 334 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 ALX1Q15699 326 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 DACT3Q96B18 629 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-203ENST00000416123 SPON2Q9BUD6 331 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 SNX24Q9Y343 169 aa11.33□□□□□ -0.6
COL12A1-203ENST00000416123 TEX33O43247 280 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 ORC4O43929 436 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 EVI5O60447 810 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 DUOXA2Q1HG44 320 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 NFRKBQ6P4R8 1299 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 CALB1P05937 261 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-203ENST00000416123 KLRK1P26718 216 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 OCRLQ01968 901 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 MLXIPLQ9NP71 852 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 CELF2O95319 508 aaKnown RBP11.32□□□□□ -0.6
COL12A1-203ENST00000416123 HMBSP08397 361 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 IRF1P10914 325 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 NEDD1Q8NHV4 660 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 ASB14A6NK59 587 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 TADA2AO75478 443 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 RPSAP08865 295 aaKnown RBP11.32□□□□□ -0.6
COL12A1-203ENST00000416123 GPS1Q13098 491 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 MXD4Q14582 209 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-203ENST00000416123 PLAAQ9Y263 795 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 GGPS1O95749 300 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 PRKCBP05771 671 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 ZNF34Q8IZ26 560 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 GBP5Q96PP8 586 aa11.32□□□□□ -0.6
COL12A1-203ENST00000416123 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 HAUS6Q7Z4H7 955 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 RASSF3Q86WH2 238 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 NDUFAF2Q8N183 169 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 IQANK1A0A1B0GTG1 560 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 CYP26A1O43174 497 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ATICP31939 592 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 KBTBD13C9JR72 458 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 KIF3CO14782 793 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 RGS7P49802 495 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ABCB6Q9NP58 842 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 MYO5BQ9ULV0 1848 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 RFC1P35251 1148 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ZKSCAN4Q969J2 545 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 PNPLA7Q6ZV29 1317 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 E5RI56 91 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 PDHBP11177 359 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SLC13A1Q9BZW2 595 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SYNGAP1Q96PV0 1343 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 MROH2AA6NES4 1674 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 SNX2O60749 519 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 IGDCC4Q8TDY8 1250 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 AGBL1Q96MI9 1066 aa11.31□□□□□ -0.6
COL12A1-203ENST00000416123 MAP3K20Q9NYL2 800 aaKnown RBP11.31□□□□□ -0.6
COL12A1-203ENST00000416123 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 CA4P22748 312 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 PHLDB3Q6NSJ2 640 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 NEK9Q8TD19 979 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 DIP2BQ9P265 1576 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 MED14O60244 1454 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 SDC4P31431 198 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 GYS2P54840 703 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 ESRRBO95718 433 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 TRIM42Q8IWZ5 723 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 RBM41Q96IZ5 413 aaKnown RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 PPP1R36Q96LQ0 422 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 GOLGA8QA0A0J9YX86 632 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 GOLGA8OA6NCC3 632 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 GOLGA8NF8WBI6 632 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 RARBP10826 455 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 KRT39Q6A163 491 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 C1orf54Q8WWF1 131 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 GTSE1Q9NYZ3 720 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms