RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 KCNK18Q7Z418 384 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 COLGALT1Q8NBJ5 622 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 PRPF31Q8WWY3 499 aaKnown RBP16.57■□□□□ 0.24
RAF1-202ENST00000416093 PSPC1Q8WXF1 523 aaKnown RBP16.57■□□□□ 0.24
RAF1-202ENST00000416093 CASD1Q96PB1 797 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 FDXACB1Q9BRP7 624 aaPredicted RBP16.57■□□□□ 0.24
RAF1-202ENST00000416093 CCSER1Q9C0I3 900 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 RAPGEFL1Q9UHV5 662 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 RCOR1Q9UKL0 485 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 PCDHB12Q9Y5F1 795 aa16.57■□□□□ 0.24
RAF1-202ENST00000416093 ASAP2O43150 1006 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 TXLNAP40222 546 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 KRT85P78386 507 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 ADAM15Q13444 863 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
RAF1-202ENST00000416093 TMEM119Q4V9L6 283 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 MAEAQ7L5Y9 396 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 KSR1Q8IVT5 923 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 GJD3Q8N144 294 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 RNF169Q8NCN4 708 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 GCOM2Q9BZD3 368 aaPredicted RBP16.56■□□□□ 0.24
RAF1-202ENST00000416093 TMEM117Q9H0C3 514 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 AAASQ9NRG9 546 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 CCDC39Q9UFE4 941 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
RAF1-202ENST00000416093 PLXNA4Q9HCM2 1894 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 CUTAO60888 179 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 TBX10O75333 385 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 FGF18O76093 207 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAF1-202ENST00000416093 CYP11B2P19099 503 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 ARL2P36404 184 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 ME1P48163 572 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 LAMTOR4Q0VGL1 99 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 RBM23Q86U06 439 aaKnown RBP16.55■□□□□ 0.24
RAF1-202ENST00000416093 ZNF410Q86VK4 478 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 MCPH1Q8NEM0 835 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
RAF1-202ENST00000416093 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
RAF1-202ENST00000416093 ARID2Q68CP9 1835 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 A0A0U1RQF3 1178 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 PLA2G4BP0C869 781 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 SRGAP2CP0DJJ0 459 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 PLCG1P19174 1290 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 SSTR3P32745 418 aaPredicted RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 NRIP1P48552 1158 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 ERVFC1P60507 584 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 MXD4Q14582 209 aaPredicted RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 CLLU1OSQ5K130 101 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 ZNF598Q86UK7 904 aaKnown RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 SYT2Q8N9I0 419 aaPredicted RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 MICAL1Q8TDZ2 1067 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 SPATA32Q96LK8 384 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 C1QTNF1Q9BXJ1 281 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 POLR3FQ9H1D9 316 aaPredicted RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
RAF1-202ENST00000416093 PCDHA7Q9UN72 937 aa16.54■□□□□ 0.24
RAF1-202ENST00000416093 HOXA2O43364 376 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 MBTPS2O43462 519 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 LAG3P18627 525 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 UBE3AQ05086 875 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 AXDND1Q5T1B0 1012 aaPredicted RBP16.53■□□□□ 0.24
RAF1-202ENST00000416093 RRAGBQ5VZM2 374 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 RINT1Q6NUQ1 792 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 HELQQ8TDG4 1101 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 ASAP3Q8TDY4 903 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
RAF1-202ENST00000416093 PPP2R3CQ969Q6 453 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 PANK2Q9BZ23 570 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 INO80BQ9C086 356 aaPredicted RBP16.53■□□□□ 0.24
RAF1-202ENST00000416093 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 FAM50BQ9Y247 325 aa16.53■□□□□ 0.24
RAF1-202ENST00000416093 PI4K2BG5E9Z4 385 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 PER2O15055 1255 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 EOMESO95936 686 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 GLRA2P23416 452 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 PBX3P40426 434 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 NDUFV1P49821 464 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 SLC12A3P55017 1021 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 TFDP1Q14186 410 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 DHX8Q14562 1220 aaKnown RBP16.52■□□□□ 0.24
RAF1-202ENST00000416093 CSPP1Q1MSJ5 1256 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 KCNT2Q6UVM3 1135 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 C1orf186Q6ZWK4 172 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 ABI1Q8IZP0 508 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 RNF149Q8NC42 400 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 LRRC15Q8TF66 581 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 RAD54LQ92698 747 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 RUSC1Q9BVN2 902 aa16.52■□□□□ 0.24
RAF1-202ENST00000416093 SCAND2PQ9GZW5 306 aaPredicted RBP16.52■□□□□ 0.24
RAF1-202ENST00000416093 TLE6Q9H808 572 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms