RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 USP17L19D6RCP7 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L20D6RJB6 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 F5H6K3 240 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 MAP3K7O43318 606 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 ATP9AO75110 1047 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 TPBGLP0DKB5 382 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 HOXA13P31271 388 aaPredicted RBP8.4□□□□□ -1.07
SIK3-203ENST00000415541 KLRC3Q07444 240 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 CCDC15Q0P6D6 951 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L24Q0WX57 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 GRM4Q14833 912 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 CNPY1Q3B7I2 92 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 GALNTL6Q49A17 601 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 ERMNQ8TAM6 284 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 CHURC1Q8WUH1 139 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 ZMAT2Q96NC0 199 aaKnown RBP8.4□□□□□ -1.07
SIK3-203ENST00000415541 DDX4Q9NQI0 724 aaKnown RBP8.4□□□□□ -1.07
SIK3-203ENST00000415541 SUGT1Q9Y2Z0 365 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 TMED5Q9Y3A6 229 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 CAPN6Q9Y6Q1 641 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 STK36Q9NRP7 1315 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 H0YGN5 161 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 HNRNPRO43390 633 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 OR52Z1P0C646 297 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 BCRP11274 1271 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 BPIFB4P59827 614 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 PDE4DQ08499 809 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 LSAMPQ13449 338 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 CYLC2Q14093 348 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 NTRK3Q16288 839 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 C6orf118Q5T5N4 469 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 PHLDB3Q6NSJ2 640 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 HHIPL2Q6UWX4 724 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 TMEM179Q6ZVK1 233 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 C16orf86Q6ZW13 317 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 USP49Q70CQ1 688 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 ZFPM1Q8IX07 1006 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 PAGE5Q96GU1 130 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 NR1H4Q96RI1 486 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 PRMT1Q99873 361 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 SPATA16Q9BXB7 569 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 AMNQ9BXJ7 453 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 CCDC134Q9H6E4 229 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 FAM217BQ9NTX9 383 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 NFS1Q9Y697 457 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 UBR2Q8IWV8 1755 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 LTBP4Q8N2S1 1624 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 RCCD1A6NED2 376 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 RAD51CO43502 376 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 DNA2P51530 1060 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 WDR59Q6PJI9 974 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 LRRC43Q8N309 656 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 ENDOVQ8N8Q3 282 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 ZNF384Q8TF68 577 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 BRD8Q9H0E9 1235 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 FBXO2Q9UK22 296 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 PCDHA12Q9UN75 941 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 ZSCAN5CA6NGD5 496 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 DCAF8L1A6NGE4 600 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 DDTLA6NHG4 134 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 H0Y3Z8 333 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 TJP3O95049 919 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 AGTP01019 485 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 ALOX15P16050 662 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 IFNAR2P48551 515 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 MKRN3Q13064 507 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 DENND2CQ68D51 928 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 STMN2Q93045 179 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 TLCD1Q96CP7 247 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 CORO1BQ9BR76 489 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 ZNF341Q9BYN7 854 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 EHD2Q9NZN4 543 aa8.39□□□□□ -1.07
SIK3-203ENST00000415541 SUCLA2Q9P2R7 463 aaPredicted RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 UTP11Q9Y3A2 253 aaKnown RBP8.39□□□□□ -1.07
SIK3-203ENST00000415541 PP2D1A8MPX8 630 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 F8VZ95 297 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 NCK2O43639 380 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 INHBCP55103 352 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 CYP4A11Q02928 519 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 GRIN1Q05586 938 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
SIK3-203ENST00000415541 RSBN1LQ6PCB5 846 aaPredicted RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 GPIHBP1Q8IV16 184 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 GRAMD1AQ96CP6 724 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 MS4A14Q96JA4 679 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 TSG101Q99816 390 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 IL17RBQ9NRM6 502 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 TBCAO75347 108 aaKnown RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 UNC5CO95185 931 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 VEGFAP15692 232 aaPredicted RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 RASSF7Q02833 373 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 FAM83BQ5T0W9 1011 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms