RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 STRA6Q9BX79 667 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 NIFKQ9BYG3 293 aaKnown RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TMX1Q9H3N1 280 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 PRDM10Q9NQV6 1147 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 AGPAT3Q9NRZ7 376 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 KCND1Q9NSA2 647 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 ZNHIT6Q9NWK9 470 aaKnown RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 CAPN11Q9UMQ6 739 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 FRMD4BQ9Y2L6 1034 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 A0A1W2PQJ5 194 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 TMEM88BA6NKF7 163 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CLIC2O15247 247 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 SLC16A4O15374 487 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 TGFB1I1O43294 461 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 ZSCAN12O43309 604 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 LGR5O75473 907 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 OFD1O75665 1012 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 ARIH2O95376 493 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GH1P01241 217 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 AFPP02771 609 aaKnown RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 XRCC5P13010 732 aaKnown RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 KRT13P13646 458 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 KRT9P35527 623 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 NPTX2P47972 431 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 FXR1P51114 621 aaKnown RBP eCLIP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 NCKAP1LP55160 1127 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GTF2BQ00403 316 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GOLGA8FQ08AF8 430 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 KCNA1Q09470 495 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GOLGA8DPQ0D2H9 430 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GRB14Q14449 540 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 HSP90AA2PQ14568 343 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 EMC2Q15006 297 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 PPP2R5AQ15172 486 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 FIGNQ5HY92 759 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CCDC62Q6P9F0 684 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 MAMDC4Q6UXC1 1216 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CYP26C1Q6V0L0 522 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 PLPPR4Q7Z2D5 763 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 TMTC1Q8IUR5 882 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 SLC9A9Q8IVB4 645 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 FAM186BQ8IYM0 893 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CCAR2Q8N163 923 aaKnown RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 C17orf53Q8N3J3 647 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 MSL3Q8N5Y2 521 aaKnown RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 NEK11Q8NG66 645 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 OR8K1Q8NGG5 319 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GPR20Q99678 358 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 JPH2Q9BR39 696 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 NTPCRQ9BSD7 190 aaKnown RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 EDEM3Q9BZQ6 932 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 POLR3FQ9H1D9 316 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 SMARCAD1Q9H4L7 1026 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 MMRN2Q9H8L6 949 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 ZFYVE28Q9HCC9 887 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 GPRC5CQ9NQ84 441 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 KMT5AQ9NQR1 393 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 PDLIM7Q9NR12 457 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 BCCIPQ9P287 314 aaKnown RBP eCLIP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CPA4Q9UI42 421 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 ABT1Q9ULW3 272 aaKnown RBP7.26□□□□□ -1.25
HDAC8-211ENST00000415409 TELO2Q9Y4R8 837 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 TLL2Q9Y6L7 1015 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 THSD7BQ9C0I4 1608 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 CASP8AP2Q9UKL3 1982 aa7.26□□□□□ -1.25
HDAC8-211ENST00000415409 RBM47A0AV96 593 aaKnown RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TTC26A0AVF1 554 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 DENND3A2RUS2 1198 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 GOLGA6L9A6NEM1 432 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 KIF2AO00139 706 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 IGF2BP3O00425 579 aaKnown RBP eCLIP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 NKRFO15226 690 aaKnown RBP eCLIP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 GAS2O43903 313 aaKnown RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 EXOC3O60645 756 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 MAFO75444 373 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 AKAP3O75969 853 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TUBB4AP04350 444 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 ATP4AP20648 1035 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 CYP2J2P51589 502 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 ZBED6P86452 979 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 STRN3Q13033 797 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 LCE2AQ5TA79 106 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 PTCRAQ6ISU1 281 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TAPT1Q6NXT6 567 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 CACNA2D4Q7Z3S7 1137 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 MAP4K3Q8IVH8 894 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 KSR1Q8IVT5 923 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 C12orf56Q8IXR9 622 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TMEM161BQ8NDZ6 487 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 DEPTORQ8TB45 409 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 ATP8B4Q8TF62 1192 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TMEM174Q8WUU8 243 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TCP11Q8WWU5 503 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 MAML3Q96JK9 1138 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 PCYT2Q99447 389 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 DNAJC7Q99615 494 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 TINF2Q9BSI4 451 aa7.25□□□□□ -1.25
HDAC8-211ENST00000415409 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
HDAC8-211ENST00000415409 ABHD16BQ9H3Z7 469 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms