RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 NLRP7Q8WX94 980 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 WNT8BQ93098 351 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 CELF4Q9BZC1 486 aaKnown RBP15.64■□□□□ 0.09
SF3B1-204ENST00000414963 INO80BQ9C086 356 aaPredicted RBP15.64■□□□□ 0.09
SF3B1-204ENST00000414963 SENP6Q9GZR1 1112 aaPredicted RBP15.64■□□□□ 0.09
SF3B1-204ENST00000414963 TRPV6Q9H1D0 765 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 HSD3B7Q9H2F3 369 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 AGPAT3Q9NRZ7 376 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 PRMT7Q9NVM4 692 aaPredicted RBP15.64■□□□□ 0.09
SF3B1-204ENST00000414963 DMAC2Q9NW81 257 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 NFE2L3Q9Y4A8 694 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 STYXL1Q9Y6J8 313 aa15.64■□□□□ 0.09
SF3B1-204ENST00000414963 TRIM49BA6NDI0 452 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 GOLGA6L19H0YKK7 550 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 FGFR1OPO95684 399 aaKnown RBP15.63■□□□□ 0.09
SF3B1-204ENST00000414963 PRKCBP05771 671 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 IQCF3P0C7M6 154 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 DARSP14868 501 aaKnown RBP15.63■□□□□ 0.09
SF3B1-204ENST00000414963 ZNF18P17022 549 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 EIF4BP23588 611 aaKnown RBP15.63■□□□□ 0.09
SF3B1-204ENST00000414963 RPL13P26373 211 aaKnown RBP15.63■□□□□ 0.09
SF3B1-204ENST00000414963 MGAT3Q09327 533 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 AMHR2Q16671 573 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 CDKAL1Q5VV42 579 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 LRRC55Q6ZSA7 311 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 FAM126BQ8IXS8 530 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 CSGALNACT2Q8N6G5 542 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 DHX38Q92620 1227 aaKnown RBP15.63■□□□□ 0.09
SF3B1-204ENST00000414963 PRIMPOLQ96LW4 560 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 CEP63Q96MT8 703 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 TOX2Q96NM4 488 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 MRPL4Q9BYD3 311 aaKnown RBP15.63■□□□□ 0.09
SF3B1-204ENST00000414963 THAP9Q9H5L6 903 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 MINDY3Q9H8M7 445 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 CDHR5Q9HBB8 845 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 FANCLQ9NW38 375 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 EVPLQ92817 2033 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 MROH7Q68CQ1 1323 aa15.63■□□□□ 0.09
SF3B1-204ENST00000414963 INO80B-WBP1J3KQ70 363 aa15.62■□□□□ 0.09
SF3B1-204ENST00000414963 TPM4P67936 248 aa15.62■□□□□ 0.09
SF3B1-204ENST00000414963 SLC39A4Q6P5W5 647 aa15.62■□□□□ 0.09
SF3B1-204ENST00000414963 IRF2BP1Q8IU81 584 aa15.62■□□□□ 0.09
SF3B1-204ENST00000414963 ACO2Q99798 780 aaKnown RBP15.62■□□□□ 0.09
SF3B1-204ENST00000414963 IKZF4Q9H2S9 585 aa15.62■□□□□ 0.09
SF3B1-204ENST00000414963 TRPV2Q9Y5S1 764 aa15.62■□□□□ 0.09
SF3B1-204ENST00000414963 ANKRD63C9JTQ0 380 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 M0QZ92 97 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 CHRNA1P02708 482 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 NR3C1P04150 777 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 GARTP22102 1010 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 ADSSP30520 456 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 THPOP40225 353 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 TMEM62Q0P6H9 643 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 ADAM9Q13443 819 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 TPD52L1Q16890 204 aaPredicted RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 SLFN12LQ6IEE8 588 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 TSHZ1Q6ZSZ6 1077 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 FILIP1Q7Z7B0 1213 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 UBE2Q1Q7Z7E8 422 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 CAGE1Q8TC20 777 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 DIS3LQ8TF46 1054 aaKnown RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 ZNF668Q96K58 619 aaPredicted RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 SCLT1Q96NL6 688 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 TARS2Q9BW92 718 aaKnown RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 SRRTQ9BXP5 876 aaKnown RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 C11orf49Q9H6J7 331 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 SAMSN1Q9NSI8 373 aaKnown RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 CDY2AQ9Y6F7 541 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 SQORQ9Y6N5 450 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 TRIP12Q14669 1992 aaPredicted RBP15.61■□□□□ 0.09
SF3B1-204ENST00000414963 CNTNAP2Q9UHC6 1331 aa15.61■□□□□ 0.09
SF3B1-204ENST00000414963 HNRNPDLO14979 420 aaKnown RBP15.6■□□□□ 0.09
SF3B1-204ENST00000414963 KIAA0391O15091 583 aaKnown RBP15.6■□□□□ 0.09
SF3B1-204ENST00000414963 CETN3O15182 167 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 TLR3O15455 904 aaKnown RBP15.6■□□□□ 0.09
SF3B1-204ENST00000414963 TOM1L1O75674 476 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 GNA14O95837 355 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 EDN1P05305 212 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 PROZP22891 400 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 NR2F2P24468 414 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 LIG4P49917 911 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 MCCD1P59942 119 aaPredicted RBP15.6■□□□□ 0.09
SF3B1-204ENST00000414963 PRPF4BQ13523 1007 aaKnown RBP15.6■□□□□ 0.09
SF3B1-204ENST00000414963 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 BICD1Q96G01 975 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 PAWRQ96IZ0 340 aaKnown RBP15.6■□□□□ 0.09
SF3B1-204ENST00000414963 PPP1R16BQ96T49 567 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 OSMRQ99650 979 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 MKNK1Q9BUB5 465 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 GRPEL1Q9HAV7 217 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 PTPRHQ9HD43 1115 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 TNFSF13BQ9Y275 285 aa15.6■□□□□ 0.09
SF3B1-204ENST00000414963 SIP14410 1827 aa15.59■□□□□ 0.09
SF3B1-204ENST00000414963 A0A0B4J269 797 aa15.59■□□□□ 0.09
SF3B1-204ENST00000414963 LRRC10BA6NIK2 292 aa15.59■□□□□ 0.09
SF3B1-204ENST00000414963 TTLL13PA6NNM8 815 aa15.59■□□□□ 0.09
SF3B1-204ENST00000414963 TISP43B9A030 160 aa15.59■□□□□ 0.09
SF3B1-204ENST00000414963 ABLIM1O14639 778 aa15.59■□□□□ 0.09
SF3B1-204ENST00000414963 CLIC2O15247 247 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms