RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 TRAIPQ9BWF2 469 aa17.87■□□□□ 0.45
CPNE1-208ENST00000414711 CHST12Q9NRB3 414 aa17.87■□□□□ 0.45
CPNE1-208ENST00000414711 FLNBO75369 2602 aaKnown RBP17.86■□□□□ 0.45
CPNE1-208ENST00000414711 GCN1Q92616 2671 aaKnown RBP17.86■□□□□ 0.45
CPNE1-208ENST00000414711 TM4SF5O14894 197 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 SKIP12755 728 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 GLUD2P49448 558 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 ADCY1Q08828 1119 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 FZD5Q13467 585 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 ZNF852Q6ZMS4 543 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 URGCPQ8TCY9 931 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 NLRP7Q8WX94 980 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 KXD1Q9BQD3 176 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 RXFP1Q9HBX9 757 aa17.86■□□□□ 0.45
CPNE1-208ENST00000414711 MRPS17Q9Y2R5 130 aaKnown RBP17.86■□□□□ 0.45
CPNE1-208ENST00000414711 ERICH2A1L162 156 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 IFIT3O14879 490 aaKnown RBP17.85■□□□□ 0.45
CPNE1-208ENST00000414711 CSDE1O75534 798 aaKnown RBP17.85■□□□□ 0.45
CPNE1-208ENST00000414711 DDHD2O94830 711 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 CEP55Q53EZ4 464 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 PALB2Q86YC2 1186 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 PHF20Q9BVI0 1012 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 CHRDQ9H2X0 955 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 LY9Q9HBG7 655 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 LHX6Q9UPM6 363 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 FAN1Q9Y2M0 1017 aa17.85■□□□□ 0.45
CPNE1-208ENST00000414711 RALGAPA1Q6GYQ0 2036 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 TGM5O43548 720 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 ALDH2P05091 517 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 SDSP20132 328 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 RAB27AP51159 221 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 TAS1R1Q7RTX1 841 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 FGF13Q92913 245 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 FAM193BQ96PV7 902 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-208ENST00000414711 IER2Q9BTL4 223 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 MARCH5Q9NX47 278 aa17.84■□□□□ 0.45
CPNE1-208ENST00000414711 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-208ENST00000414711 PIN4Q9Y237 131 aaKnown RBP17.84■□□□□ 0.45
CPNE1-208ENST00000414711 MAFBQ9Y5Q3 323 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-208ENST00000414711 TMEM8BA6NDV4 472 aa17.83■□□□□ 0.44
CPNE1-208ENST00000414711 NRP1O14786 923 aa17.83■□□□□ 0.44
CPNE1-208ENST00000414711 GAS2O43903 313 aaKnown RBP17.83■□□□□ 0.44
CPNE1-208ENST00000414711 C1RP00736 705 aa17.83■□□□□ 0.44
CPNE1-208ENST00000414711 CCR3P51677 355 aa17.83■□□□□ 0.44
CPNE1-208ENST00000414711 RING1Q06587 406 aa17.83■□□□□ 0.44
CPNE1-208ENST00000414711 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
CPNE1-208ENST00000414711 GRASPQ7Z6J2 395 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-208ENST00000414711 PRG3Q9Y2Y8 225 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-208ENST00000414711 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 ZMYND10O75800 440 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 KCNK5O95279 499 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 SFPQP23246 707 aaKnown RBP eCLIP17.82■□□□□ 0.448e-7■□□□□ 11.1
CPNE1-208ENST00000414711 NTHL1P78549 312 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 DSG1Q02413 1049 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 TRDNQ13061 729 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 MAMSTRQ6ZN01 415 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 RNF168Q8IYW5 571 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 C12orf50Q8NA57 414 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 CTCFLQ8NI51 663 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 PGBD4Q96DM1 585 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 TMEM121BQ9BXQ6 578 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 GCOM2Q9BZD3 368 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 HEBP1Q9NRV9 189 aa17.82■□□□□ 0.44
CPNE1-208ENST00000414711 NDRG2Q9UN36 371 aaKnown RBP17.82■□□□□ 0.44
CPNE1-208ENST00000414711 MTCL1Q9Y4B5 1905 aaKnown RBP17.81■□□□□ 0.44
CPNE1-208ENST00000414711 SHISA7A6NL88 538 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 MEIS1O00470 390 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 HRO43593 1189 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 ZNF623O75123 536 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 SMARCA1P28370 1054 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 SRSF5Q13243 272 aaKnown RBP17.81■□□□□ 0.44
CPNE1-208ENST00000414711 SF3A2Q15428 464 aaKnown RBP17.81■□□□□ 0.44
CPNE1-208ENST00000414711 GLYCTKQ8IVS8 523 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 PGBD1Q96JS3 809 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 FAM167AQ96KS9 214 aa17.81■□□□□ 0.44
CPNE1-208ENST00000414711 EFEMP2O95967 443 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
CPNE1-208ENST00000414711 AFF1P51825 1210 aaKnown RBP17.8■□□□□ 0.44
CPNE1-208ENST00000414711 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
CPNE1-208ENST00000414711 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 PSAPL1Q6NUJ1 521 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 LILRA6Q6PI73 481 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 AGMOQ6ZNB7 445 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 ZNF687Q8N1G0 1237 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-208ENST00000414711 RSAD1Q9HA92 442 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 RXFP3Q9NSD7 469 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 KANSL3Q9P2N6 904 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 DOCK6Q96HP0 2047 aa17.8■□□□□ 0.44
CPNE1-208ENST00000414711 MYH9P35579 1960 aaKnown RBP17.8■□□□□ 0.44
CPNE1-208ENST00000414711 CHURC1-FNTBB4DL54 471 aa17.79■□□□□ 0.44
CPNE1-208ENST00000414711 DHX15O43143 795 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms