RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CTCFLQ8NI51 663 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 BRF1Q92994 677 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 PAWRQ96IZ0 340 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 UPF3BQ9BZI7 483 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 CYP39A1Q9NYL5 469 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 COL20A1Q9P218 1284 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 DDX20Q9UHI6 824 aaKnown RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 GDF2Q9UK05 429 aaPredicted RBP5.62□□□□□ -1.51
VPS41-205ENST00000414632 PRKAB1Q9Y478 270 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 SLC12A7Q9Y666 1083 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 PFASO15067 1338 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 WDR19Q8NEZ3 1342 aa5.62□□□□□ -1.51
VPS41-205ENST00000414632 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 UPK3BL1B0FP48 263 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 UPK3BL2E5RIL1 263 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 ZBTB5O15062 677 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SEPT4O43236 478 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 ZBTB43O43298 467 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 DNAJA2O60884 412 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 ABCB11O95342 1321 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 PGK1P00558 417 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 CFBP00751 764 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SLFN14P0C7P3 912 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 ZNF865P0CJ78 1059 aaPredicted RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 EPXP11678 715 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 NME1P15531 152 aaKnown RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 HOXA13P31271 388 aaPredicted RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 KIF5BP33176 963 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 LIFRP42702 1097 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 ALDH5A1P51649 535 aaPredicted RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 NLRP12P59046 1061 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 STK3Q13188 491 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 ACVR2BQ13705 512 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 NCAPHQ15003 741 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SUZ12Q15022 739 aaKnown RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 ZC3H12AQ5D1E8 599 aaKnown RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 RNFT1Q5M7Z0 435 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 TMEM201Q5SNT2 666 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 OVOS1Q6IE37 1185 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 APOA5Q6Q788 366 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 VHLLQ6RSH7 139 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SYNE3Q6ZMZ3 975 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 C8orf86Q6ZUL3 223 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 NLRC3Q7RTR2 1065 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SGMS1Q86VZ5 419 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SRBD1Q8N5C6 995 aaKnown RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 KLHL23Q8NBE8 558 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 FERMT2Q96AC1 680 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 MTMR8Q96EF0 704 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SYNGAP1Q96PV0 1343 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 TAAR1Q96RJ0 339 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 AMNQ9BXJ7 453 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 RIOX1Q9H6W3 641 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 PCDH12Q9NPG4 1184 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 PDGFCQ9NRA1 345 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 OGDHLQ9ULD0 1010 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 PCDHB10Q9UN67 800 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 CNPY2Q9Y2B0 182 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 DIS3Q9Y2L1 958 aaKnown RBP5.61□□□□□ -1.51
VPS41-205ENST00000414632 PCDHA1Q9Y5I3 950 aa5.61□□□□□ -1.51
VPS41-205ENST00000414632 CEP290O15078 2479 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 LTBP2Q14767 1821 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 CNTNAP5Q8WYK1 1306 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 SYNRGQ9UMZ2 1314 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 MYADML2A6NDP7 307 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 FAM86C2PA6NEL3 165 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 CHURC1-FNTBB4DL54 471 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 M0R082 166 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 TM4SF5O14894 197 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 DDX3YO15523 660 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 PGRP06401 933 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 CALM1P0DP23 149 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 CALM2P0DP24 149 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 CALM3P0DP25 149 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 RARBP10826 455 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 AKR1A1P14550 325 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 PSMA5P28066 241 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 ADCYAP1R1P41586 468 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 METAP2P50579 478 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS41-205ENST00000414632 CCT2P78371 535 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 BEX3Q00994 111 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 TOB2Q14106 344 aaPredicted RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 SETDB1Q15047 1291 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 MAMDC4Q6UXC1 1216 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 TMTC3Q6ZXV5 915 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 RUFY3Q7L099 469 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 HEATR3Q7Z4Q2 680 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 TMTC2Q8N394 836 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 FANCBQ8NB91 859 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 GALNT11Q8NCW6 608 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 ZNF417Q8TAU3 575 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 SYTL5Q8TDW5 730 aaPredicted RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 DPF3Q92784 378 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 PHKBQ93100 1093 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 ZNF669Q96BR6 464 aaPredicted RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 RRP36Q96EU6 259 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 ZNF587Q96SQ5 575 aaPredicted RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 MTA3Q9BTC8 594 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms