RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 C2orf16Q68DN1 1984 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 INO80B-WBP1J3KQ70 363 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 ASAP2O43150 1006 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 TSPAN1O60635 241 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 CLASP2O75122 1294 aaKnown RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 GALTP07902 379 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 SP100P23497 879 aaPredicted RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 HOXA11P31270 313 aaPredicted RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 SLC11A1P49279 550 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 RARRES1P49788 294 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 CAPSQ13938 189 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 SYCE2Q6PIF2 218 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 MAEAQ7L5Y9 396 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 ZNF280BQ86YH2 543 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 FAM122AQ96E09 287 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 IGSF21Q96ID5 467 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 PHF7Q9BWX1 381 aaPredicted RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 EIF2AQ9BY44 585 aaKnown RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 ZBP1Q9H171 429 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 POLR3FQ9H1D9 316 aaPredicted RBP17.3■□□□□ 0.36
ACTB-202ENST00000414620 ANKEF1Q9NU02 776 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 HCFC2Q9Y5Z7 792 aa17.3■□□□□ 0.36
ACTB-202ENST00000414620 DENND4AQ7Z401 1863 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 DGAT1O75907 488 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 DDHD2O94830 711 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 LYPLA2O95372 231 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 CXCL14O95715 111 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 POMCP01189 267 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
ACTB-202ENST00000414620 PLA2G5P39877 138 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 PTENP60484 403 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 TFDP1Q14186 410 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 ZNF174Q15697 407 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 TMEM184AQ6ZMB5 413 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 MRPL10Q7Z7H8 261 aaKnown RBP17.29■□□□□ 0.36
ACTB-202ENST00000414620 MRPL43Q8N983 215 aaKnown RBP17.29■□□□□ 0.36
ACTB-202ENST00000414620 SUSD6Q92537 303 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 CASP10Q92851 521 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 FAM193BQ96PV7 902 aaPredicted RBP17.29■□□□□ 0.36
ACTB-202ENST00000414620 APOL6Q9BWW8 343 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 S1PR5Q9H228 398 aa17.29■□□□□ 0.36
ACTB-202ENST00000414620 LOC730098B7Z3J9 87 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 MED24O75448 989 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 SSBP05455 408 aaKnown RBP eCLIP17.28■□□□□ 0.36
ACTB-202ENST00000414620 ITGA4P13612 1032 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 GLRA2P23416 452 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 MBTD1Q05BQ5 628 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 MXD4Q14582 209 aaPredicted RBP17.28■□□□□ 0.36
ACTB-202ENST00000414620 CBX2Q14781 532 aaPredicted RBP17.28■□□□□ 0.36
ACTB-202ENST00000414620 HERC4Q5GLZ8 1057 aaPredicted RBP17.28■□□□□ 0.36
ACTB-202ENST00000414620 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
ACTB-202ENST00000414620 SMG8Q8ND04 991 aaKnown RBP17.28■□□□□ 0.36
ACTB-202ENST00000414620 VN1R3Q9BXE9 311 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 HES2Q9Y543 173 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 IPPQ9Y573 584 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 TECTAO75443 2155 aa17.28■□□□□ 0.36
ACTB-202ENST00000414620 CNTNAP2Q9UHC6 1331 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 SPATA31C1P0DKV0 1188 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 CTSAP10619 480 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 NCLP19338 710 aaKnown RBP17.27■□□□□ 0.36
ACTB-202ENST00000414620 ARL2P36404 184 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
ACTB-202ENST00000414620 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
ACTB-202ENST00000414620 C8orf34Q49A92 452 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 DDX53Q86TM3 631 aaKnown RBP17.27■□□□□ 0.36
ACTB-202ENST00000414620 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 RSPH1Q8WYR4 309 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 KIF2CQ99661 725 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
ACTB-202ENST00000414620 MYO10Q9HD67 2058 aa17.27■□□□□ 0.35
ACTB-202ENST00000414620 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 LRRIQ4A6NIV6 560 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 B4GALT5O43286 388 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 EPCAMP16422 314 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 ARF4P18085 180 aaPredicted RBP17.26■□□□□ 0.35
ACTB-202ENST00000414620 MLH1P40692 756 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 NBR1Q14596 966 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 RARS2Q5T160 578 aaKnown RBP17.26■□□□□ 0.35
ACTB-202ENST00000414620 KANK3Q6NY19 840 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 POTEGQ6S5H5 508 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 C12orf76Q8N812 135 aaPredicted RBP17.26■□□□□ 0.35
ACTB-202ENST00000414620 GAD1Q99259 594 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 LLPHQ9BRT6 129 aaKnown RBP17.26■□□□□ 0.35
ACTB-202ENST00000414620 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
ACTB-202ENST00000414620 KMT2EQ8IZD2 1858 aa17.26■□□□□ 0.35
ACTB-202ENST00000414620 NPTXRO95502 500 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 AXLP30530 894 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 SCNN1GP51170 649 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 PTPN14Q15678 1187 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms