RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CCDC105Q8IYK2 499 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 ACSF2Q96CM8 615 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-210ENST00000413578 PGBD4Q96DM1 585 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 JPH2Q9BR39 696 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-210ENST00000413578 RHOBTB2Q9BYZ6 727 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
LIMS2-210ENST00000413578 MINDY3Q9H8M7 445 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 KCNK12Q9HB15 430 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 MARCH5Q9NX47 278 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 WRAP73Q9P2S5 460 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-210ENST00000413578 VAV3Q9UKW4 847 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 COL4A3BPQ9Y5P4 624 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
LIMS2-210ENST00000413578 DCHS1Q96JQ0 3298 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 DDX11L8A8MPP1 907 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 SLC37A4O43826 429 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 SOD2P04179 222 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 NPEPPSP55786 919 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
LIMS2-210ENST00000413578 PPP2R5CQ13362 524 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 TDGQ13569 410 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 BLIDQ8IZY5 108 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-210ENST00000413578 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
LIMS2-210ENST00000413578 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 MFSD1Q9H3U5 465 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 RSAD1Q9HA92 442 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 PPME1Q9Y570 386 aa13.63□□□□□ -0.23
LIMS2-210ENST00000413578 NRP1O14786 923 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 KLRC2P26717 231 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 FLCNQ8NFG4 579 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 NKD2Q969F2 451 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 HERC2P3Q9BVR0 1158 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 RXFP1Q9HBX9 757 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 IGSF9Q9P2J2 1179 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 KANSL3Q9P2N6 904 aa13.62□□□□□ -0.23
LIMS2-210ENST00000413578 DDX25Q9UHL0 483 aaKnown RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 EP300Q09472 2414 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-210ENST00000413578 TEX28O15482 410 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 DEXIO95424 95 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 ALDH2P05091 517 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
LIMS2-210ENST00000413578 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
LIMS2-210ENST00000413578 PSMA5P28066 241 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 QARSP47897 775 aaKnown RBP13.61□□□□□ -0.23
LIMS2-210ENST00000413578 DSC1Q08554 894 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 LAMTOR4Q0VGL1 99 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 GALNT17Q6IS24 598 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 CYP26C1Q6V0L0 522 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 TAS1R1Q7RTX1 841 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 SLC7A3Q8WY07 619 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 RTP3Q9BQQ7 232 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
LIMS2-210ENST00000413578 MAN1C1Q9NR34 630 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
LIMS2-210ENST00000413578 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 FAN1Q9Y2M0 1017 aa13.61□□□□□ -0.23
LIMS2-210ENST00000413578 DNAH14Q0VDD8 3507 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 KRBA1A5PL33 1030 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 NARSO43776 548 aaKnown RBP13.6□□□□□ -0.23
LIMS2-210ENST00000413578 POMCP01189 267 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 URODP06132 367 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
LIMS2-210ENST00000413578 RFC5P40937 340 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 DSG1Q02413 1049 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 NONOQ15233 471 aaKnown RBP eCLIP13.6□□□□□ -0.23
LIMS2-210ENST00000413578 ANGPT1Q15389 498 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 INF2Q27J81 1249 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 KIAA0319Q5VV43 1072 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 TRIM22Q8IYM9 498 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 SIX5Q8N196 739 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 DTWD2Q8NBA8 298 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 PSPC1Q8WXF1 523 aaKnown RBP13.6□□□□□ -0.23
LIMS2-210ENST00000413578 HAS1Q92839 578 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 TMEM143Q96AN5 459 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 ZNF707Q96C28 371 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-210ENST00000413578 CEP170P1Q96L14 293 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 FAM20AQ96MK3 541 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 WNT16Q9UBV4 365 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 IPPQ9Y573 584 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 303.9 ms