RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MIER3Q7Z3K6 550 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 KAT5Q92993 513 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 RIT2Q99578 217 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
TTC39A-208ENST00000413473 ZBTB21Q9ULJ3 1066 aa16.17■□□□□ 0.18
TTC39A-208ENST00000413473 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 H0YIN7 160 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 BACH1O14867 736 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 GPC5P78333 572 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 RAPGEF5Q92565 580 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 C18orf8Q96DM3 657 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 SH2D3AQ9BRG2 576 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 KIAA0391O15091 583 aaKnown RBP16.16■□□□□ 0.18
TTC39A-208ENST00000413473 HNRNPH1P31943 449 aaKnown RBP16.16■□□□□ 0.18
TTC39A-208ENST00000413473 HADHBP55084 474 aaKnown RBP16.16■□□□□ 0.18
TTC39A-208ENST00000413473 DHX34Q14147 1143 aaKnown RBP16.16■□□□□ 0.18
TTC39A-208ENST00000413473 C1orf220Q5T0J3 134 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 C6orf89Q6UWU4 347 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 UBL4BQ8N7F7 174 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 FBXO25Q8TCJ0 367 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 PSMD1Q99460 953 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 EPB41L4BQ9H329 900 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 TMEM206Q9H813 350 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 TMOD2Q9NZR1 351 aa16.16■□□□□ 0.18
TTC39A-208ENST00000413473 RBBP6Q7Z6E9 1792 aaKnown RBP16.16■□□□□ 0.18
TTC39A-208ENST00000413473 H0YHG0 523 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 CAND2O75155 1236 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 FSBPO95073 299 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 SHBGP04278 402 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 EIF3BP55884 814 aaKnown RBP16.15■□□□□ 0.18
TTC39A-208ENST00000413473 MESDQ14696 234 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 QPCTQ16769 361 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 EPC2Q52LR7 807 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 ZDHHC14Q8IZN3 488 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 DDX20Q9UHI6 824 aaKnown RBP16.15■□□□□ 0.18
TTC39A-208ENST00000413473 GGA2Q9UJY4 613 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 ZHX2Q9Y6X8 837 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 MIF4GDA9UHW6 222 aaKnown RBP16.15■□□□□ 0.18
TTC39A-208ENST00000413473 SGPL1O95470 568 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 P4HBP07237 508 aaKnown RBP16.15■□□□□ 0.18
TTC39A-208ENST00000413473 CHRNA5P30532 468 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 GRIPAP1Q4V328 841 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 C11orf63Q6NUN7 778 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 ZDHHC24Q6UX98 284 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 TRMT1LQ7Z2T5 733 aaKnown RBP16.15■□□□□ 0.18
TTC39A-208ENST00000413473 PRELID2Q8N945 189 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 PLEKHO2Q8TD55 490 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 ACCSQ96QU6 501 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 ACP6Q9NPH0 428 aa16.15■□□□□ 0.18
TTC39A-208ENST00000413473 COMTP21964 271 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PTGIRP43119 386 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PMS2P54278 862 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 DRG2P55039 364 aaKnown RBP16.14■□□□□ 0.17
TTC39A-208ENST00000413473 CLUL1Q15846 466 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 XXYLT1Q8NBI6 393 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 MDM1Q8TC05 714 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 AGBL1Q96MI9 1066 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 ZSWIM1Q9BR11 485 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PABPC3Q9H361 631 aaKnown RBP16.14■□□□□ 0.17
TTC39A-208ENST00000413473 HSPBP1Q9NZL4 362 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PFASO15067 1338 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 P4HA2O15460 535 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PHF2O75151 1096 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 RTN2O75298 545 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 CNPY4Q8N129 248 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
TTC39A-208ENST00000413473 NEK9Q8TD19 979 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 TLCD1Q96CP7 247 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
TTC39A-208ENST00000413473 RASAL2Q9UJF2 1139 aa16.14■□□□□ 0.17
TTC39A-208ENST00000413473 PAEPP09466 180 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 CHRNB2P17787 502 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 RARRES1P49788 294 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 PEX5P50542 639 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 SUGP1Q8IWZ8 645 aaKnown RBP16.13■□□□□ 0.17
TTC39A-208ENST00000413473 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-208ENST00000413473 TMEM117Q9H0C3 514 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 COL20A1Q9P218 1284 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 PNMA2Q9UL42 364 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 TLDC2A0PJX2 215 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 GOLGA8IPA6NC78 632 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 GOLGA8JA6NMD2 632 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
TTC39A-208ENST00000413473 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 PLS3P13797 630 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 CHRNA3P32297 505 aa16.13■□□□□ 0.17
TTC39A-208ENST00000413473 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-208ENST00000413473 STYK1Q6J9G0 422 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms