RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 FIZ1Q96SL8 496 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 PANK2Q9BZ23 570 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 PRMT7Q9NVM4 692 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-210ENST00000412342 PCDHB7Q9Y5E2 793 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 ATG2AQ2TAZ0 1938 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 A0A1B0GUA9 196 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 MYMKA6NI61 221 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 MEIS3P2A8K0S8 358 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 ACKR2O00590 384 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 EOMESO95936 686 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 PRKCBP05771 671 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 FGFR1P11362 822 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 ANP32AP39687 249 aaKnown RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 STAT6P42226 847 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 RAB27AP51159 221 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 NCKAP1LP55160 1127 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 DMP1Q13316 513 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 CLLU1OSQ5K130 101 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 ADALQ6DHV7 355 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 NOTUMQ6P988 496 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 MRPL10Q7Z7H8 261 aaKnown RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 CLP1Q92989 425 aaKnown RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 SPATA32Q96LK8 384 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 CDX2Q99626 313 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 C17orf80Q9BSJ5 609 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 EIF2AQ9BY44 585 aaKnown RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 TMEM134Q9H6X4 195 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 LRFN2Q9ULH4 789 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-210ENST00000412342 USP20Q9Y2K6 914 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 PCDHB2Q9Y5E7 798 aa14.53□□□□□ -0.08
HDAC8-210ENST00000412342 FAM237AA0A1B0GTK4 181 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 LPXNO60711 386 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 NCLP19338 710 aaKnown RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 IBSPP21815 317 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 EFNA5P52803 228 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 BTG3Q14201 252 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 MAPK6Q16659 721 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 NT5DC1Q5TFE4 455 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 SV2BQ7L1I2 683 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 CDR2LQ86X02 465 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 TMEM161BQ8NDZ6 487 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 LPPQ93052 612 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 CASD1Q96PB1 797 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 TGS1Q96RS0 853 aaKnown RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 SCAND2PQ9GZW5 306 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 PDZD7Q9H5P4 517 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 CERS4Q9HA82 394 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 GDPD2Q9HCC8 539 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 KMT5AQ9NQR1 393 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 HCSTQ9UBK5 93 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 HPSEQ9Y251 543 aa14.52□□□□□ -0.09
HDAC8-210ENST00000412342 MRPL42Q9Y6G3 142 aaKnown RBP14.52□□□□□ -0.09
HDAC8-210ENST00000412342 MYO9BQ13459 2157 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 FRMD3A2A2Y4 597 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 CCDC169A6NNP5 214 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 SLC16A4O15374 487 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 MAPTP10636 758 aaKnown RBP14.51□□□□□ -0.09
HDAC8-210ENST00000412342 SKIP12755 728 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 CMA1P23946 247 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 PRPF4BQ13523 1007 aaKnown RBP14.51□□□□□ -0.09
HDAC8-210ENST00000412342 ADGRE1Q14246 886 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 PAN2Q504Q3 1202 aaKnown RBP14.51□□□□□ -0.09
HDAC8-210ENST00000412342 EEF1DP3Q658K8 133 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 AGMOQ6ZNB7 445 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 FIBCD1Q8N539 461 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 MYLIPQ8WY64 445 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 DDX12PQ92771 950 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 DHX58Q96C10 678 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 TMEM117Q9H0C3 514 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 TNMDQ9H2S6 317 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 CUEDC2Q9H467 287 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 PARVGQ9HBI0 331 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 LARSQ9P2J5 1176 aaKnown RBP14.51□□□□□ -0.09
HDAC8-210ENST00000412342 RBM19Q9Y4C8 960 aaKnown RBP14.51□□□□□ -0.09
HDAC8-210ENST00000412342 IPPQ9Y573 584 aa14.51□□□□□ -0.09
HDAC8-210ENST00000412342 PLXNA4Q9HCM2 1894 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 TBKBP1A7MCY6 615 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 K7ERI5 159 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 RFXAPO00287 272 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 ABLIM1O14639 778 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 POLR2DO15514 142 aaKnown RBP14.5□□□□□ -0.09
HDAC8-210ENST00000412342 HOXA2O43364 376 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 FAM13AO94988 1023 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 EPC2Q52LR7 807 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 SLC27A1Q6PCB7 646 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 DYMQ7RTS9 669 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 IQUBQ8NA54 791 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 RNF169Q8NCN4 708 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 HELQQ8TDG4 1101 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 ARNTL2Q8WYA1 636 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 STAMQ92783 540 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms