RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 KLHL17Q6TDP4 642 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 NUDT18Q6ZVK8 323 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TCAIMQ8N3R3 496 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 OR4M2Q8NGB6 313 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 DNAJC9Q8WXX5 260 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 NLRP3Q96P20 1036 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ZMYND12Q9H0C1 365 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 DSN1Q9H410 356 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 GOLPH3LQ9H4A5 285 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 POLR3EQ9NVU0 708 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 BAIAP2Q9UQB8 552 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SYNGAP1Q96PV0 1343 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MED7O43513 233 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SKAP2O75563 359 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ATF2P15336 505 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 VCLP18206 1134 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SERPINB3P29508 390 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MARCKSP29966 332 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PIK3CAP42336 1068 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MAGEA8P43361 318 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RAD51Q06609 339 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RRS1Q15050 365 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CDO1Q16878 200 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TBRG1Q3YBR2 411 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 C5orf22Q49AR2 442 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 INTS11Q5TA45 600 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RSBN1Q5VWQ0 802 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 COPS6Q7L5N1 327 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 AACSQ86V21 672 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ASPNQ9BXN1 380 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KCNH3Q9ULD8 1083 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PASKQ96RG2 1323 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KPNA7A9QM74 516 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PDCD5O14737 125 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SGSM2O43147 1006 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TSPAN1O60635 241 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 OSBPP22059 807 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PTGS1P23219 599 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PSME1Q06323 249 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MAPK11Q15759 364 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 IRGCQ6NXR0 463 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CYP4Z2PQ8N1L4 340 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TSPAN14Q8NG11 270 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CALML6Q8TD86 181 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SECISBP2LQ93073 1101 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 HES6Q96HZ4 224 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ITCHQ96J02 903 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CLMNQ96JQ2 1002 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 FAM193BQ96PV7 902 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 LGMNQ99538 433 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PNPLA8Q9NP80 782 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KLHL1Q9NR64 748 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 FNDC3AQ9Y2H6 1198 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PEG3Q9GZU2 1588 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MIA2Q96PC5 1412 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PNMA8CA0A1B0GUJ8 204 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MPZL2O60487 215 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KPNA6O60684 536 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 STX11O75558 287 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 DCKP27707 260 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ELK3P41970 407 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ACADSBP45954 432 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 HSPA13P48723 471 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ALDH3A2P51648 485 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 GFPT1Q06210 699 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RAPGEF1Q13905 1077 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ARHGEF6Q15052 776 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TSNQ15631 228 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 EAPPQ56P03 285 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ELAC2Q9BQ52 826 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CHCHD6Q9BRQ6 235 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 HDHD2Q9H0R4 259 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 GLT8D2Q9H1C3 349 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC86Q9H6F5 360 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RHBDL2Q9NX52 303 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SLC5A4Q9NY91 659 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CEP72Q9P209 647 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TUBGCP4Q9UGJ1 667 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 EIF4G1Q04637 1599 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 LRRC14BA6NHZ5 514 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TRIM64CA6NLI5 447 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KLHL41O60662 606 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ST5P78524 1137 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ZSCAN26Q16670 478 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ARHGEF16Q5VV41 709 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 DCDC5Q6ZRR9 648 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MTURNQ8N3F0 131 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CAAP1Q9H8G2 361 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 CYLDQ9NQC7 956 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SETD4Q9NVD3 440 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TBK1Q9UHD2 729 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TTC41PQ6P2S7 1318 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 NR1D1P20393 614 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 GUCY2CP25092 1073 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 YY1P25490 414 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ITGA3P26006 1051 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MORC3Q14149 939 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AADACL4Q5VUY2 407 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ERICH5Q6P6B1 374 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms