RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 WASHC2CQ9Y4E1 1318 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CARMIL1Q5VZK9 1371 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PCF11O94913 1555 aaKnown RBP3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 YEATS2Q9ULM3 1422 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MASP2O00187 686 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KIF3BO15066 747 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SGSM2O43147 1006 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PLIN1O60240 522 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MARCH6O60337 910 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AMY2AP04746 511 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CHGBP05060 677 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AMY2BP19961 511 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 COMTP21964 271 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PTGS1P23219 599 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 STAT5AP42229 794 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 RECQLP46063 649 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 GPR15P49685 360 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NFATC3Q12968 1075 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ADAM9Q13443 819 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PIN1Q13526 163 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SPIDRQ14159 915 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TTF1Q15361 905 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TERF2Q15554 542 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MAN2A1Q16706 1144 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 BROXQ5VW32 411 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PRAMEF9Q5VWM5 478 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CXXC5Q7LFL8 322 aaKnown RBP3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 STRA8Q7Z7C7 330 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 IFNL2Q8IZJ0 200 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 DLG3Q92796 817 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZSWIM3Q96MP5 696 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 GBP4Q96PP9 640 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 LMF1Q96S06 567 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ELF4Q99607 663 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CD244Q9BZW8 370 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZDHHC5Q9C0B5 715 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CDIP1Q9H305 208 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KLHL42Q9P2K6 505 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MSRAQ9UJ68 235 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MAGI2Q86UL8 1455 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CUL7Q14999 1698 aa3.38□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FANCAO15360 1455 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 GOLGA8AA7E2F4 631 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 GOLGA8BA8MQT2 603 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ARNTLO00327 626 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KATNA1O75449 491 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CNOT4O95628 575 aaKnown RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZBTB48P10074 688 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MYBL2P10244 700 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SLC9A1P19634 815 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ACO1P21399 889 aaKnown RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 APEX1P27695 318 aaKnown RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AOAHP28039 575 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SESN2P58004 480 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ALDH6A1Q02252 535 aaKnown RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MTMR1Q13613 665 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CLUL1Q15846 466 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PTPN21Q16825 1174 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZNF568Q3ZCX4 644 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 RRP12Q5JTH9 1297 aaKnown RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TMEM240Q5SV17 173 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SLFN12LQ6IEE8 588 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 IL17DQ8TAD2 202 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AUTS2Q8WXX7 1259 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CLIP3Q96DZ5 547 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 HIST1H2AHQ96KK5 128 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NUP88Q99567 741 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PRRX2Q99811 253 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 HIST1H2AJQ99878 128 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SEC61A2Q9H9S3 476 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 INCENPQ9NQS7 918 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PTGFRNQ9P2B2 879 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CROTQ9UKG9 612 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PNMA8BQ9ULN7 279 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 GIT1Q9Y2X7 761 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MAP3K4Q9Y6R4 1608 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 BIVM-ERCC5R4GMW8 1640 aa3.37□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AKNAQ7Z591 1439 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KLHL33A6NCF5 533 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FAM83GA6ND36 823 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TRIM75PA6NK02 468 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 XPOTO43592 962 aaKnown RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CUTAO60888 179 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MAFO75444 373 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PRKD3O94806 890 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 C4BPAP04003 597 aaKnown RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ENPP1P22413 925 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MRPS9P82933 396 aaKnown RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SMAD3P84022 425 aaKnown RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 COL10A1Q03692 680 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ADCY2Q08462 1091 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 DBPQ10586 325 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FSTL1Q12841 308 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SMAD2Q15796 467 aaKnown RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FSCN1Q16658 493 aaKnown RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 UGT8Q16880 541 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ANO4Q32M45 955 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZNF362Q5T0B9 420 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 EFCAB2Q5VUJ9 269 aa3.36□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CCSAPQ6IQ19 270 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms