RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MTMR10Q9NXD2 777 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 FAM13BQ9NYF5 915 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 LARSQ9P2J5 1176 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ARHGAP28Q9P2N2 729 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ACKR2O00590 384 aa21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 B4GALT5O43286 388 aa21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 HOXA2O43364 376 aa21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 ZNF131P52739 623 aa21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 CACNB1Q02641 598 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 CPB2Q96IY4 423 aa21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 PCDHB2Q9Y5E7 798 aa21.89■■□□□ 1.09
PDLIM2-207ENST00000409417 CNTNAP2Q9UHC6 1331 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 A0A1B0GUA9 196 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 K7ERI5 159 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 FAM13AO94988 1023 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 PRKCBP05771 671 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 ATF7P17544 494 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 CMA1P23946 247 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 BTG3Q14201 252 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 GRIN2CQ14957 1233 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 UBXN11Q5T124 520 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 CMTR2Q8IYT2 770 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 FIBCD1Q8N539 461 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 TGS1Q96RS0 853 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 PARVGQ9HBI0 331 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 PHLPP2Q6ZVD8 1323 aa21.88■■□□□ 1.09
PDLIM2-207ENST00000409417 COL4A6Q14031 1691 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 MYMKA6NI61 221 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 SLC16A4O15374 487 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 TBCAO75347 108 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 FGFR1P11362 822 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 PRPF4BQ13523 1007 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 RNF169Q8NCN4 708 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 DDX12PQ92771 950 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 PYM1Q9BRP8 204 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 TMEM134Q9H6X4 195 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 KCNH3Q9ULD8 1083 aa21.87■■□□□ 1.09
PDLIM2-207ENST00000409417 POLR2DO15514 142 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 LIG1P18858 919 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 GATMP50440 423 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 ERVK-21P61565 698 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 MRPL10Q7Z7H8 261 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 MYCT1Q8N699 235 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 TMEM161BQ8NDZ6 487 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 DHX58Q96C10 678 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 TMEM117Q9H0C3 514 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 TNMDQ9H2S6 317 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 RNF19AQ9NV58 838 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 KBTBD4Q9NVX7 518 aa21.86■■□□□ 1.09
PDLIM2-207ENST00000409417 TTLL13PA6NNM8 815 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 H0YCG3 227 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 SLC27A1Q6PCB7 646 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 DYMQ7RTS9 669 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 SPRED2Q7Z698 418 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 KCNN1Q92952 543 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 CLP1Q92989 425 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 DNAJC19Q96DA6 116 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 GUCD1Q96NT3 240 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 CDX2Q99626 313 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 EIF2AQ9BY44 585 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 LRRC27Q9C0I9 530 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 MAGEF1Q9HAY2 307 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 GDPD2Q9HCC8 539 aa21.85■■□□□ 1.09
PDLIM2-207ENST00000409417 A0A1W2PQ27 194 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 A0A1W2PQ64 194 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 A0A1W2PQD8 194 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 TBKBP1A7MCY6 615 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 MAPTP10636 758 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 SCP2P22307 547 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 CLLU1OSQ5K130 101 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 TAS1R3Q7RTX0 852 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 ABI1Q8IZP0 508 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 CNNM3Q8NE01 707 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 ARNTL2Q8WYA1 636 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 RSPH1Q8WYR4 309 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 PGBD4Q96DM1 585 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 SAMD11Q96NU1 681 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 CASD1Q96PB1 797 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 ZHX3Q9H4I2 956 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 CERS4Q9HA82 394 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 TCHHQ07283 1943 aa21.84■■□□□ 1.09
PDLIM2-207ENST00000409417 N4BP3O15049 544 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 TRAK2O60296 914 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 EDN1P05305 212 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 LINC00271P0C7V0 271 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 NCKAP1LP55160 1127 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 AMPD3Q01432 767 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 TMEM132AQ24JP5 1023 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 PAN2Q504Q3 1202 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 NT5DC1Q5TFE4 455 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 SMG8Q8ND04 991 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 LPPQ93052 612 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 C17orf80Q9BSJ5 609 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 MRPL4Q9BYD3 311 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 TRIM6Q9C030 488 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 PRDM12Q9H4Q4 367 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 PDZD7Q9H5P4 517 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 CHMP5Q9NZZ3 219 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 MTUS1Q9ULD2 1270 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 USP20Q9Y2K6 914 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms