RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 COL11A1P12107 1806 aaPredicted RBP4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 PFASO15067 1338 aa4.34□□□□□ -1.71
LRRTM4-201ENST00000409088 SSU72P8A0A1W2PR75 194 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 DENND3A2RUS2 1198 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 EFCAB8A8MWE9 144 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 HOXA2O43364 376 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 TADA3O75528 432 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 STBD1O95210 358 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 SUPT20HL2P0C7V6 817 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 PNMA6AP0CW24 399 aaPredicted RBP4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 NAP1L1P55209 391 aaKnown RBP4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 GTF2BQ00403 316 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 BFSP1Q12934 665 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 ASTE1Q2TB18 679 aaPredicted RBP4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 CBWD6Q4V339 395 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 CBWD3Q5JTY5 395 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 CBWD5Q5RIA9 395 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 MTERF4Q7Z6M4 381 aaKnown RBP4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC9A9Q8IVB4 645 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 XXYLT1Q8NBI6 393 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 BSNDQ8WZ55 320 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 SYN2Q92777 582 aaPredicted RBP4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 SECISBP2LQ93073 1101 aaKnown RBP4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC10A4Q96EP9 437 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 MAP7D2Q96T17 732 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 TIPINQ9BVW5 301 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 MLXIPQ9HAP2 919 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF302Q9NR11 478 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 CYP26B1Q9NR63 512 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 HSPBP1Q9NZL4 362 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 AIPL1Q9NZN9 384 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 RBPJLQ9UBG7 517 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 HDAC6Q9UBN7 1215 aa4.34□□□□□ -1.72
LRRTM4-201ENST00000409088 ANKRD63C9JTQ0 380 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 RRP9O43818 475 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CNMDO75829 334 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 DGAT1O75907 488 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MOCS3O95396 460 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ATP1A1P05023 1023 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 UBA1P22314 1058 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CNGA1P29973 690 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ICAM3P32942 547 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 NCKAP1LP55160 1127 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 DLG4P78352 724 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PPP2R5AQ15172 486 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 XKR3Q5GH77 459 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MAP1SQ66K74 1059 aaPredicted RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 DPY19L2P1Q6NXN4 242 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF662Q6ZS27 426 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 FASTKD5Q7L8L6 764 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 EHBP1Q8NDI1 1231 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TMEM161BQ8NDZ6 487 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 KIFAP3Q92845 792 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 THAP11Q96EK4 314 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TSGA10Q9BZW7 698 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PDCL3Q9H2J4 239 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SIX2Q9NPC8 291 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PRDM10Q9NQV6 1147 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CGNQ9P2M7 1197 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 AJAP1Q9UKB5 411 aaPredicted RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MYO6Q9UM54 1294 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TBX20Q9UMR3 447 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 KCNH4Q9UQ05 1017 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 RBBP6Q7Z6E9 1792 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 A0A087X0T9 212 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GTPBP10A4D1E9 387 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 BUB1O43683 1085 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SRGAP2O75044 1071 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TACC1O75410 805 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 LCA5LO95447 670 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GGPS1O95749 300 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC25A27O95847 323 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM228BP0C875 321 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CYP2C8P10632 490 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ATP4AP20648 1035 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GCLMP48507 274 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 VAMP7P51809 220 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 POLGP54098 1239 aaPredicted RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MYL7Q01449 175 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PTK2Q05397 1052 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MYBPC2Q14324 1141 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 KCTD2Q14681 263 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ARHGAP44Q17R89 818 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 LY6KQ17RY6 165 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 IQCEQ6IPM2 695 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 FBXO38Q6PIJ6 1188 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 INTS8Q75QN2 995 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF571Q7Z3V5 609 aaPredicted RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 IRF2BP2Q7Z5L9 587 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SRGAP1Q7Z6B7 1085 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CEP112Q8N8E3 955 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MCPH1Q8NEM0 835 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ARMC2Q8NEN0 867 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TMEM143Q96AN5 459 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SAAL1Q96ER3 474 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 BICD1Q96G01 975 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 IFT74Q96LB3 600 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM117AQ9C073 453 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MAF1Q9H063 256 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms