RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 NCAPGQ9BPX3 1015 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 MTA3Q9BTC8 594 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ECT2Q9H8V3 914 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 NKIRAS1Q9NYS0 192 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 MTUS1Q9ULD2 1270 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 SUFUQ9UMX1 484 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 TMEM120BA0PK00 339 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 IGF2BP3O00425 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNX13-201ENST00000409076 GNA14O95837 355 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ETS1P14921 441 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ATP2B4P23634 1241 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 DNAJC3Q13217 504 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ATP13A4Q4VNC1 1196 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ZBTB33Q86T24 672 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 ZNF564Q8TBZ8 553 aaPredicted RBP8.95□□□□□ -0.98
SNX13-201ENST00000409076 DTX3LQ8TDB6 740 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 TMEM117Q9H0C3 514 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 RAVER2Q9HCJ3 691 aaKnown RBP8.95□□□□□ -0.98
SNX13-201ENST00000409076 RNF14Q9UBS8 474 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 COG5Q9UP83 839 aa8.95□□□□□ -0.98
SNX13-201ENST00000409076 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 GPR75-ASB3A0A0A6YYF3 556 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 O00370 1275 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 CHKAP35790 457 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 ACOT2P49753 483 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 NUMBP49757 651 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 PPP2R5DQ14738 602 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 SMTNL2Q2TAL5 461 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 PADI6Q6TGC4 694 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 NT5DC3Q86UY8 548 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 SH3GL2Q99962 352 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 FAM213AQ9BRX8 229 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 NUCKS1Q9H1E3 243 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 TYW1Q9NV66 732 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 SAE1Q9UBE0 346 aaPredicted RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 MRPL42Q9Y6G3 142 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 SLIT2O94813 1529 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 CCDC195A0A1B0GUA6 201 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 EME2A4GXA9 379 aaPredicted RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 HNRNPDLO14979 420 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 CSDE1O75534 798 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 KITP10721 976 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 CD19P15391 556 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 MTMR3Q13615 1198 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 RPAINQ86UA6 219 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 SLC5A5Q92911 643 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 WDR11Q9BZH6 1224 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 METTL5Q9NRN9 209 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 CHST7Q9NS84 486 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 RNF19AQ9NV58 838 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 CCPG1Q9ULG6 757 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 MYH3P11055 1940 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 TJP1Q07157 1748 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 KRT19P08727 400 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 BCRP11274 1271 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 TARSP26639 723 aaKnown RBP8.94□□□□□ -0.98
SNX13-201ENST00000409076 PSMD2Q13200 908 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 FBF1Q8TES7 1133 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 RIOX1Q9H6W3 641 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 ZWILCHQ9H900 591 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 SAYSD1Q9NPB0 183 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 FAM114A2Q9NRY5 505 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 ASTN1O14525 1302 aa8.94□□□□□ -0.98
SNX13-201ENST00000409076 DUOX1Q9NRD9 1551 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CHUKO15111 745 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 FECHP22830 423 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 TM4SF1P30408 202 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 NOP14P78316 857 aaKnown RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 MXRA7P84157 204 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 RCN2Q14257 317 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 GPATCH4Q5T3I0 446 aaKnown RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 SLFN12Q8IYM2 578 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 NSMCE1Q8WV22 266 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 RFFLQ8WZ73 363 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 TATDN2Q93075 761 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CAVIN3Q969G5 261 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CEP63Q96MT8 703 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CYTH2Q99418 400 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 AGPAT1Q99943 283 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 ERP44Q9BS26 406 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 KCTD10Q9H3F6 313 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 ETNK1Q9HBU6 452 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 G3BP2Q9UN86 482 aaKnown RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 A0A0G2JND7 137 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 EDIL3O43854 480 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 ECEL1O95672 775 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 POLR2MP0CAP2 368 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CUL1Q13616 776 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 KIF22Q14807 665 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 EPHA7Q15375 998 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 TMEM119Q4V9L6 283 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 ANKRD20A8PQ5CZ79 823 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CTAGE3PQ8IX95 158 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PROM2Q8N271 834 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 DAGLBQ8NCG7 672 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PPP1R13LQ8WUF5 828 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 TGS1Q96RS0 853 aaKnown RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 SHCBP1LQ9BZQ2 653 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 NSRP1Q9H0G5 558 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms