RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MRPS9P82933 396 aaKnown RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 PRR16Q569H4 304 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 HERC4Q5GLZ8 1057 aaPredicted RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 TLK2Q86UE8 772 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 KRT222Q8N1A0 295 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 SYT2Q8N9I0 419 aaPredicted RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 SLC43A3Q8NBI5 491 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 ETNPPLQ8TBG4 499 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 SYN2Q92777 582 aaPredicted RBP14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 TTYH3Q9C0H2 523 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 GBP3Q9H0R5 595 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 CD320Q9NPF0 282 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 CHD7Q9P2D1 2997 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 GRIN2DO15399 1336 aa14.12□□□□□ -0.15
SMARCB1-203ENST00000407082 FRMD3A2A2Y4 597 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 PI4K2BG5E9Z4 385 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 ERLIN1O75477 346 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 CYP2C9P11712 490 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 CYP11B2P19099 503 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 SSTR3P32745 418 aaPredicted RBP14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 CKAP4Q07065 602 aaKnown RBP14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 KIF5AQ12840 1032 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 BRD3Q15059 726 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 MIIPQ5JXC2 388 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 NCAPH2Q6IBW4 605 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 IQCEQ6IPM2 695 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 TAPT1Q6NXT6 567 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 SEPT14Q6ZU15 432 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 NEK9Q8TD19 979 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 WDR11Q9BZH6 1224 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 KATNBL1Q9H079 304 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 DEF6Q9H4E7 631 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 METTL14Q9HCE5 456 aaKnown RBP14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 PDGFCQ9NRA1 345 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 PLAGL2Q9UPG8 496 aa14.11□□□□□ -0.15
SMARCB1-203ENST00000407082 LRRC37A2A6NM11 1700 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 ANO9A1A5B4 782 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 CTAGE15A4D2H0 777 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 TBCAO75347 108 aaKnown RBP14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 RGS20O76081 388 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 EYA4O95677 639 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 CTAGE8P0CG41 777 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 SLC12A3P55017 1021 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 CHMP4BP1P59074 171 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 TAP1Q03518 808 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 CCDC122Q5T0U0 273 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 IQSEC1Q6DN90 963 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 RSRC2Q7L4I2 434 aaKnown RBP14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 CTAGE6Q86UF2 777 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 NLRX1Q86UT6 975 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 FMNL3Q8IVF7 1028 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 CTAGE4Q8IX94 777 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 SLC35F6Q8N357 371 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 ACRBPQ8NEB7 543 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 JAKMIP2Q96AA8 810 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 INPP4AQ96PE3 977 aaPredicted RBP14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 MMRN2Q9H8L6 949 aa14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 NHEJ1Q9H9Q4 299 aaPredicted RBP14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 TRMT13Q9NUP7 481 aaKnown RBP14.1□□□□□ -0.15
SMARCB1-203ENST00000407082 REV3LO60673 3130 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 SSU72P8A0A1W2PR75 194 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 POTEB3A0JP26 581 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 E9PMD0 336 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 PDXKO00764 312 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 TACC1O75410 805 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 ARHGEF15O94989 841 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 ITGB5P18084 799 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 GNPTABQ3T906 1256 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 CEP55Q53EZ4 464 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 CCDC70Q6NSX1 233 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 FBXO38Q6PIJ6 1188 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 POTEBQ6S5H4 581 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 LRRC55Q6ZSA7 311 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 KCNK18Q7Z418 384 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 FRMD5Q7Z6J6 570 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 ZC3H3Q8IXZ2 948 aaKnown RBP14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 CYP2W1Q8TAV3 490 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 SCFD2Q8WU76 684 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 CHP1Q99653 195 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 MXRA8Q9BRK3 442 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 JADE2Q9NQC1 790 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 CEP72Q9P209 647 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 MYO6Q9UM54 1294 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 SIK3Q9Y2K2 1263 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 DAAM1Q9Y4D1 1078 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 UBIAD1Q9Y5Z9 338 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 V9GYY5 206 aaPredicted RBP14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 UBE4BO95155 1302 aa14.09□□□□□ -0.15
SMARCB1-203ENST00000407082 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
SMARCB1-203ENST00000407082 PRR33A8MZF0 331 aa14.08□□□□□ -0.16
SMARCB1-203ENST00000407082 FAM86B1E9PN63 330 aa14.08□□□□□ -0.16
SMARCB1-203ENST00000407082 MEIS1O00470 390 aa14.08□□□□□ -0.16
SMARCB1-203ENST00000407082 MED24O75448 989 aa14.08□□□□□ -0.16
SMARCB1-203ENST00000407082 PFKMP08237 780 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms