RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ZNRF3Q9ULT6 936 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 USP20Q9Y2K6 914 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 ICAM1P05362 532 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
PCNX4-204ENST00000406949 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 RUFY4Q6ZNE9 571 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 CYFIP1Q7L576 1253 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 PALB2Q86YC2 1186 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 KIFAP3Q92845 792 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
PCNX4-204ENST00000406949 ASIC3Q9UHC3 531 aa12.84□□□□□ -0.35
PCNX4-204ENST00000406949 LRRIQ4A6NIV6 560 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 WDR64B1ANS9 1081 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SLCO1A2P46721 670 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 MFAP3P55082 362 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 CUL1Q13616 776 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 PPP2R5AQ15172 486 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 TTMPQ5BVD1 217 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 IWS1Q96ST2 819 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 TOPORSQ9NS56 1045 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-204ENST00000406949 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
PCNX4-204ENST00000406949 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 PLS3P13797 630 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 RARRES1P49788 294 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 LIG4P49917 911 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 FKBP1AP62942 108 aaKnown RBP12.83□□□□□ -0.36
PCNX4-204ENST00000406949 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SNRNP48Q6IEG0 339 aaKnown RBP12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SWSAP1Q6NVH7 229 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 AADACL2Q6P093 401 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 OTUD6AQ7L8S5 288 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 MTRF1LQ9UGC7 380 aaKnown RBP12.83□□□□□ -0.36
PCNX4-204ENST00000406949 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 ANKRD62A6NC57 917 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 WNT10BO00744 389 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SGPL1O95470 568 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 CXCL9Q07325 125 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 MTMR3Q13615 1198 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 CPLX4Q7Z7G2 160 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 ZSWIM2Q8NEG5 633 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 ATG4CQ96DT6 458 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 SIX2Q9NPC8 291 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 COL20A1Q9P218 1284 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 ALG6Q9Y672 507 aa12.83□□□□□ -0.36
PCNX4-204ENST00000406949 ZBTB7AO95365 584 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 CALCAP01258 141 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 TMEM253P0C7T8 217 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 HSD17B3P37058 310 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 PRKCIP41743 596 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 SEC24CP53992 1094 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 GPC5P78333 572 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 TRIP13Q15645 432 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 NEK9Q8TD19 979 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 C1orf112Q9NSG2 853 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 TBC1D22BQ9NU19 505 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 SUCLA2Q9P2R7 463 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 GOLGA6L7A0A1B0GV03 622 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 PSMC5P62195 406 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 STRN3Q13033 797 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 NT5DC3Q86UY8 548 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 RHOT2Q8IXI1 618 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 CRYGNQ8WXF5 182 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 CAVIN3Q969G5 261 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 ATP6V1G3Q96LB4 118 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 NUP85Q9BW27 656 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 ISCUQ9H1K1 167 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 POLGP54098 1239 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-204ENST00000406949 HMGCS2P54868 508 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 EEPD1Q7L9B9 569 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 RUBCNQ92622 972 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 WRNIP1Q96S55 665 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 GDF3Q9NR23 364 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 FAM114A2Q9NRY5 505 aa12.82□□□□□ -0.36
PCNX4-204ENST00000406949 ZNF233A6NK53 670 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 EIF3HO15372 352 aaKnown RBP eCLIP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 GUCY2CP25092 1073 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 ITGB3BPQ13352 177 aaPredicted RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 MICALCLQ6ZW33 695 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms