RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 C18orf8Q96DM3 657 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 TMEM39BQ9GZU3 492 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 KCNH7Q9NS40 1196 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 PFASO15067 1338 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 KIAA0391O15091 583 aaKnown RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 MTA2O94776 668 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 TMOD1P28289 359 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 C11orf63Q6NUN7 778 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 SLC39A4Q6P5W5 647 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 NLRP14Q86W24 1093 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 SYCE1Q8N0S2 351 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 EPS8L1Q8TE68 723 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 DDX1Q92499 740 aaKnown RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 ELMO3Q96BJ8 720 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 CCT8L2Q96SF2 557 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 PCIF1Q9H4Z3 704 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 AGO4Q9HCK5 861 aaKnown RBP10.66□□□□□ -0.7
MSH2-202ENST00000406134 AMFRQ9UKV5 643 aa10.66□□□□□ -0.7
MSH2-202ENST00000406134 A0A087WUV0 522 aaPredicted RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 SRRM3A6NNA2 597 aaPredicted RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 SGPL1O95470 568 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 GTF2BQ00403 316 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 PPARDQ03181 441 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 MYBPC2Q14324 1141 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 ARHGAP44Q17R89 818 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 TNFAIP8L3Q5GJ75 292 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 PADI6Q6TGC4 694 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 FAM151AQ8WW52 585 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 TMEM117Q9H0C3 514 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 GPRC5CQ9NQ84 441 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 ZYXQ15942 572 aaKnown RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 ADAT2Q7Z6V5 191 aaKnown RBP10.65□□□□□ -0.7
MSH2-202ENST00000406134 RIT2Q99578 217 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 DPH5Q9H2P9 285 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 ALG6Q9Y672 507 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
MSH2-202ENST00000406134 C5orf60A6NFR6 353 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 G3V3G9 751 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 PMM2O15305 246 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 TBC1D12O60347 775 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 STBD1O95210 358 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 FMO1Q01740 532 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 ZNF746Q6NUN9 644 aaPredicted RBP10.65□□□□□ -0.71
MSH2-202ENST00000406134 FAM71AQ8IYT1 594 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 RUFY1Q96T51 708 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 HERPUD2Q9BSE4 406 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 ST6GALNAC4Q9H4F1 302 aa10.65□□□□□ -0.71
MSH2-202ENST00000406134 DBR1Q9UK59 544 aaKnown RBP10.65□□□□□ -0.71
MSH2-202ENST00000406134 BACH1O14867 736 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 FAM107AO95990 144 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 CCNE2O96020 404 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 MAPTP10636 758 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 CTNNA1P35221 906 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 LIG3P49916 1009 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 TKFCQ3LXA3 575 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 AGBL2Q5U5Z8 902 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 RSBN1LQ6PCB5 846 aaPredicted RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 SLC47A2Q86VL8 602 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 CNPY4Q8N129 248 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 BTBD6Q96KE9 485 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 TEKT3Q9BXF9 490 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 ARHGEF10LQ9HCE6 1279 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 PTPRFP10586 1907 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 K7ENM7 598 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 ATP9AO75110 1047 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 GCLMP48507 274 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 VAMP7P51809 220 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 HLTFQ14527 1009 aaKnown RBP eCLIP10.64□□□□□ -0.71
MSH2-202ENST00000406134 CYP1B1Q16678 543 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 MAEAQ7L5Y9 396 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 RPUSD2Q8IZ73 545 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 PSPC1Q8WXF1 523 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 ERP44Q9BS26 406 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 MTFR1LQ9H019 292 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 UBE2TQ9NPD8 197 aaPredicted RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 HSPBP1Q9NZL4 362 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 FRMD4BQ9Y2L6 1034 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 ADGRA3Q8IWK6 1321 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 EBAG9O00559 213 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 NDUFAB1O14561 156 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 CAND2O75155 1236 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 LYPLA2O95372 231 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 CALCAP01258 141 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms