RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DEPTORQ8TB45 409 aa22.98■■□□□ 1.27
TPM1-208ENST00000404484 ZNF830Q96NB3 372 aaPredicted RBP22.98■■□□□ 1.27
TPM1-208ENST00000404484 ERGIC2Q96RQ1 377 aa22.98■■□□□ 1.27
TPM1-208ENST00000404484 NUP58Q9BVL2 599 aa22.98■■□□□ 1.27
TPM1-208ENST00000404484 ALPK3Q96L96 1907 aa22.98■■□□□ 1.27
TPM1-208ENST00000404484 PHLPP2Q6ZVD8 1323 aa22.98■■□□□ 1.27
TPM1-208ENST00000404484 A0A1W2PQ45 241 aaPredicted RBP22.97■■□□□ 1.27
TPM1-208ENST00000404484 A0A1W2PQY0 241 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 A6NJR5 290 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 ZBTB42B2RXF5 422 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 ASGR1P07306 291 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 GLRA2P23416 452 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 FSCN1Q16658 493 aaKnown RBP22.97■■□□□ 1.27
TPM1-208ENST00000404484 ARMCX5Q6P1M9 558 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 C7orf61Q8IZ16 206 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 PCSK9Q8NBP7 692 aaKnown RBP22.97■■□□□ 1.27
TPM1-208ENST00000404484 RETREG2Q8NC44 543 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 PSPC1Q8WXF1 523 aaKnown RBP22.97■■□□□ 1.27
TPM1-208ENST00000404484 C16orf70Q9BSU1 422 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 MOXD2PA6NHM9 499 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 H3BRB1 525 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 MAGEB2O15479 319 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 AKAP3O75969 853 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 CPT1AP50416 773 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 CNGA4Q8IV77 575 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 FAM186BQ8IYM0 893 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 ASAP3Q8TDY4 903 aa22.97■■□□□ 1.27
TPM1-208ENST00000404484 TUT1Q9H6E5 874 aaKnown RBP22.97■■□□□ 1.27
TPM1-208ENST00000404484 LRRIQ4A6NIV6 560 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 AKR1B15C9JRZ8 316 aaPredicted RBP22.96■■□□□ 1.27
TPM1-208ENST00000404484 ZNF286BP0CG31 522 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 STRN3Q13033 797 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 HSP90AA2PQ14568 343 aaPredicted RBP22.96■■□□□ 1.27
TPM1-208ENST00000404484 PTPN21Q16825 1174 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 CCDC51Q96ER9 411 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 KIFC3Q9BVG8 833 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 RNPEPQ9H4A4 650 aa22.96■■□□□ 1.27
TPM1-208ENST00000404484 RANBP2P49792 3224 aaKnown RBP22.95■■□□□ 1.26
TPM1-208ENST00000404484 EXOC3O60645 756 aa22.95■■□□□ 1.26
TPM1-208ENST00000404484 CYP2J2P51589 502 aa22.95■■□□□ 1.26
TPM1-208ENST00000404484 EFNA5P52803 228 aa22.95■■□□□ 1.26
TPM1-208ENST00000404484 SNX17Q15036 470 aa22.95■■□□□ 1.26
TPM1-208ENST00000404484 TMEM134Q9H6X4 195 aa22.95■■□□□ 1.26
TPM1-208ENST00000404484 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.95■■□□□ 1.26
TPM1-208ENST00000404484 ADGRA3Q8IWK6 1321 aa22.95■■□□□ 1.26
TPM1-208ENST00000404484 MAPK13O15264 365 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 ASAP2O43150 1006 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 INSRRP14616 1297 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 LRMPQ12912 555 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 TFDP1Q14186 410 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 ARID5BQ14865 1188 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 SYCP1Q15431 976 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 C1orf53Q5VUE5 145 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 PCMTD1Q96MG8 357 aaPredicted RBP22.94■■□□□ 1.26
TPM1-208ENST00000404484 C2orf40Q9H1Z8 148 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 SUGCTQ9HAC7 445 aa22.94■■□□□ 1.26
TPM1-208ENST00000404484 RBL2Q08999 1139 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 FIGNQ5HY92 759 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 CXCL17Q6UXB2 119 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 XXYLT1Q8NBI6 393 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 PRPF31Q8WWY3 499 aaKnown RBP22.93■■□□□ 1.26
TPM1-208ENST00000404484 BICD1Q96G01 975 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 PANX2Q96RD6 677 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 STARD7Q9NQZ5 370 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 SUCLA2Q9P2R7 463 aaPredicted RBP22.93■■□□□ 1.26
TPM1-208ENST00000404484 ATP11BQ9Y2G3 1177 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 K7ERI5 159 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 HNRNPDLO14979 420 aaKnown RBP22.93■■□□□ 1.26
TPM1-208ENST00000404484 MFAP3LO75121 409 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 C22orf31O95567 290 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 AFPP02771 609 aaKnown RBP22.93■■□□□ 1.26
TPM1-208ENST00000404484 GYPCP04921 128 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 SKILP12757 684 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 CASP4P49662 377 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 CAPSQ13938 189 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 TRIM60Q495X7 471 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 ZBTB8OSQ8IWT0 167 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 TC2NQ8N9U0 490 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 VTI1AQ96AJ9 217 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 GLT1D1Q96MS3 346 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 IKZF4Q9H2S9 585 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 HSPBP1Q9NZL4 362 aa22.93■■□□□ 1.26
TPM1-208ENST00000404484 ZMYND8Q9ULU4 1186 aaPredicted RBP22.93■■□□□ 1.26
TPM1-208ENST00000404484 RRN3P2A6NIE6 340 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 KIAA0391O15091 583 aaKnown RBP22.92■■□□□ 1.26
TPM1-208ENST00000404484 ZEB2O60315 1214 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 F2P00734 622 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 KRT13P13646 458 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 TRIM21P19474 475 aaKnown RBP22.92■■□□□ 1.26
TPM1-208ENST00000404484 GARTP22102 1010 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 TMOD1P28289 359 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 CCZ1BP86790 482 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 CCZ1P86791 482 aaPredicted RBP22.92■■□□□ 1.26
TPM1-208ENST00000404484 LAMTOR4Q0VGL1 99 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 KCNH2Q12809 1159 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 PPFIA1Q13136 1202 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 EFCAB12Q6NXP0 572 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 INTS8Q75QN2 995 aaKnown RBP22.92■■□□□ 1.26
TPM1-208ENST00000404484 BORCS6Q96GS4 357 aa22.92■■□□□ 1.26
TPM1-208ENST00000404484 PCDH10Q9P2E7 1040 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms