RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 MLXIPQ9HAP2 919 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 DNAJC12Q9UKB3 198 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 STYXL1Q9Y6J8 313 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 CAPN6Q9Y6Q1 641 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 TACC1O75410 805 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 PIGRP01833 764 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 CETPP11597 493 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 GLRA2P23416 452 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 NAMPTP43490 491 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
CLIP4-203ENST00000401617 NAB2Q15742 525 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 SNRNP35Q16560 246 aaKnown RBP13.34□□□□□ -0.27
CLIP4-203ENST00000401617 PHLDB3Q6NSJ2 640 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 VTI1AQ96AJ9 217 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 GPR20Q99678 358 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 JRKLQ9Y4A0 524 aa13.34□□□□□ -0.27
CLIP4-203ENST00000401617 ENC1O14682 589 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 PRLRP16471 622 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 TCF7P36402 384 aaPredicted RBP13.33□□□□□ -0.28
CLIP4-203ENST00000401617 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 MAP1SQ66K74 1059 aaPredicted RBP13.33□□□□□ -0.28
CLIP4-203ENST00000401617 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 GPR161Q8N6U8 529 aaKnown RBP13.33□□□□□ -0.28
CLIP4-203ENST00000401617 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 GOLGA1Q92805 767 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 FAM167AQ96KS9 214 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 NAGPAQ9UK23 515 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 COQ4Q9Y3A0 265 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 SAR1BQ9Y6B6 198 aa13.33□□□□□ -0.28
CLIP4-203ENST00000401617 EVI5O60447 810 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 MAFO75444 373 aaPredicted RBP13.32□□□□□ -0.28
CLIP4-203ENST00000401617 MOCS3O95396 460 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 CYP2C8P10632 490 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 GTF2H1P32780 548 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 GCLMP48507 274 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 GTF2A2P52657 109 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 CETN1Q12798 172 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 EEPD1Q7L9B9 569 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 PLPPR4Q7Z2D5 763 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 GPRC5AQ8NFJ5 357 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 SLC30A5Q8TAD4 765 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 TMEM143Q96AN5 459 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLIP4-203ENST00000401617 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 ASB14A6NK59 587 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 BTBD19C9JJ37 291 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 TFRCP02786 760 aaKnown RBP13.32□□□□□ -0.28
CLIP4-203ENST00000401617 CYP24A1Q07973 514 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
CLIP4-203ENST00000401617 HSDL1Q3SXM5 330 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 ANKRD23Q86SG2 305 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 SLC7A3Q8WY07 619 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 SAAL1Q96ER3 474 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 TMEM134Q9H6X4 195 aa13.32□□□□□ -0.28
CLIP4-203ENST00000401617 LRRIQ3A6PVS8 624 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 PDHXO00330 501 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 DDX3XO00571 662 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 KLRC1P26715 233 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 MXI1P50539 228 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 CCNA1P78396 465 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 KIF22Q14807 665 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ABRAQ8N0Z2 381 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 GPD1LQ8N335 351 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 BBXQ8WY36 941 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 POMGNT1Q8WZA1 660 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 KIAA1586Q9HCI6 787 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 DIS3Q9Y2L1 958 aaKnown RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 IGKV6-21A0A0C4DH24 114 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ZBTB42B2RXF5 422 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 HNRNPDLO14979 420 aaKnown RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 CCDC172P0C7W6 258 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 PNMA6AP0CW24 399 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ZSCAN20P17040 1043 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 GCLCP48506 637 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 VPS36Q86VN1 386 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 FBXO16Q8IX29 292 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 ALS2CR12Q96Q35 445 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 PACSIN1Q9BY11 444 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms