RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 RSAD2Q8WXG1 361 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 KCNB2Q92953 911 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 RTP3Q9BQQ7 232 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 TMEM175Q9BSA9 504 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 RSAD1Q9HA92 442 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 MAN1C1Q9NR34 630 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 EVPLQ92817 2033 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 CCDC195A0A1B0GUA6 201 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 CFHP08603 1231 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
VAMP1-203ENST00000400911 HOXA11P31270 313 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-203ENST00000400911 ID4P47928 161 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 NPEPPSP55786 919 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 UBXN11Q5T124 520 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
VAMP1-203ENST00000400911 CMASQ8NFW8 434 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-203ENST00000400911 PRPF31Q8WWY3 499 aaKnown RBP16.31■□□□□ 0.2
VAMP1-203ENST00000400911 JPH2Q9BR39 696 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-203ENST00000400911 MINDY3Q9H8M7 445 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 IGSF9Q9P2J2 1179 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 COL4A3BPQ9Y5P4 624 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 SNX14Q9Y5W7 946 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
VAMP1-203ENST00000400911 KRBA1A5PL33 1030 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 EML1O00423 815 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 SOD2P04179 222 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 URODP06132 367 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 GBP2P32456 591 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-203ENST00000400911 ERMP1Q7Z2K6 904 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 SLC7A3Q8WY07 619 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 TMEM143Q96AN5 459 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 MBOAT7Q96N66 472 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 RPS6KC1Q96S38 1066 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 AGXT2Q9BYV1 514 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 C22orf23Q9BZE7 217 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 WDR6Q9NNW5 1121 aaKnown RBP16.3■□□□□ 0.2
VAMP1-203ENST00000400911 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
VAMP1-203ENST00000400911 PRG3Q9Y2Y8 225 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-203ENST00000400911 WDR87Q6ZQQ6 2873 aa16.3■□□□□ 0.2
VAMP1-203ENST00000400911 CNTNAP2Q9UHC6 1331 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 DNAH14Q0VDD8 3507 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 TEX28O15482 410 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 CDC45O75419 566 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 RFPL2O75678 378 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 OR1G1P47890 313 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 QARSP47897 775 aaKnown RBP16.29■□□□□ 0.2
VAMP1-203ENST00000400911 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 BLIDQ8IZY5 108 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 SLC44A3Q8N4M1 653 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 CEP170P1Q96L14 293 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-203ENST00000400911 MARCH5Q9NX47 278 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 WRAP73Q9P2S5 460 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-203ENST00000400911 WNT16Q9UBV4 365 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 CA14Q9ULX7 337 aa16.29■□□□□ 0.2
VAMP1-203ENST00000400911 M0R2N6 131 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 INPPL1O15357 1258 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SLC37A4O43826 429 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 GLUD1P00367 558 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 ADH1AP07327 375 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SPATA31D3P0C874 917 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 NCLP19338 710 aaKnown RBP16.28■□□□□ 0.2
VAMP1-203ENST00000400911 HSPA4P34932 840 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
VAMP1-203ENST00000400911 KIAA0319Q5VV43 1072 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SPATA31D4Q6ZUB0 917 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 COLGALT2Q8IYK4 626 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SMG8Q8ND04 991 aaKnown RBP16.28■□□□□ 0.2
VAMP1-203ENST00000400911 PSPC1Q8WXF1 523 aaKnown RBP16.28■□□□□ 0.2
VAMP1-203ENST00000400911 STAMQ92783 540 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 MYADMQ96S97 322 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SLKQ9H2G2 1235 aaPredicted RBP16.28■□□□□ 0.2
VAMP1-203ENST00000400911 DHX33Q9H6R0 707 aaKnown RBP16.28■□□□□ 0.2
VAMP1-203ENST00000400911 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 FRYLO94915 3013 aa16.28■□□□□ 0.2
VAMP1-203ENST00000400911 CLUHO75153 1309 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 F8W810 466 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 ITGA4P13612 1032 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 RFX1P22670 979 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 EVCP57679 992 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 PPP2R5CQ13362 524 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 NONOQ15233 471 aaKnown RBP eCLIP16.27■□□□□ 0.2
VAMP1-203ENST00000400911 INF2Q27J81 1249 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 MOXD1Q6UVY6 613 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 CYP26C1Q6V0L0 522 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 RNF149Q8NC42 400 aa16.27■□□□□ 0.2
VAMP1-203ENST00000400911 SMG7Q92540 1137 aaKnown RBP16.27■□□□□ 0.2
VAMP1-203ENST00000400911 GAD1Q99259 594 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms