RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ADAM21Q9UKJ8 722 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 NOC2LQ9Y3T9 749 aaKnown RBP19.39■□□□□ 0.69
COL18A1-204ENST00000400337 STAT5BP51692 787 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 E2F5Q15329 346 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 PRR12Q9ULL5 1215 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 MRFAP1Q9Y605 127 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 GRID2IPA4D2P6 1211 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 ENTPD3O75355 529 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 RHOBTB3O94955 611 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 RFC1P35251 1148 aaPredicted RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 DUOXA2Q1HG44 320 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 PPWD1Q96BP3 646 aaKnown RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 IRX2Q9BZI1 471 aaPredicted RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 MID2Q9UJV3 735 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 CLGNO14967 610 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 CYP26A1O43174 497 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 HDLBPQ00341 1268 aaKnown RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 ATG16L1Q676U5 607 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 PITPNM3Q9BZ71 974 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 PDS5AQ29RF7 1337 aaKnown RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 A0A087WUV0 522 aaPredicted RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 MYMKA6NI61 221 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 CREB3O43889 395 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 TMTC4Q5T4D3 741 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 CNOT7Q9UIV1 285 aaKnown RBP19.38■□□□□ 0.69
COL18A1-204ENST00000400337 COPEO14579 308 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 CHRNA3P32297 505 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 PMS2P54278 862 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 TRIM59Q8IWR1 403 aa19.38■□□□□ 0.69
COL18A1-204ENST00000400337 SPARCL1Q14515 664 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 AGPAT1Q99943 283 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 GCOM2Q9BZD3 368 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-204ENST00000400337 ZNF70Q9UC06 446 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-204ENST00000400337 CNTNAP5Q8WYK1 1306 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 RHOT1Q8IXI2 618 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 SRRM1Q8IYB3 904 aaKnown RBP19.37■□□□□ 0.69
COL18A1-204ENST00000400337 WNT8AQ9H1J5 351 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 KRT10P13645 584 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 TSPY1Q01534 308 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 VPS39Q96JC1 886 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 EPS15L1Q9UBC2 864 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 KRT7P08729 469 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 MYBL1P10243 752 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 ADORA2BP29275 332 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 MAGOHP61326 146 aaKnown RBP19.37■□□□□ 0.69
COL18A1-204ENST00000400337 CAV1Q03135 178 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 FAM102AQ5T9C2 384 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-204ENST00000400337 HIBCHQ6NVY1 386 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-204ENST00000400337 LPAR1Q92633 364 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 TEX13BQ9BXU2 312 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 HSPBP1Q9NZL4 362 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 TUBE1Q9UJT0 475 aa19.37■□□□□ 0.69
COL18A1-204ENST00000400337 COG7P83436 770 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 HP1BP3Q5SSJ5 553 aaPredicted RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 PDZD8Q8NEN9 1154 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 ELP3Q9H9T3 547 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 TXNP10599 105 aaKnown RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 ESRRAP11474 423 aaPredicted RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 TMPRSS15P98073 1019 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 CCDC137Q6PK04 289 aaKnown RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 EXT2Q93063 718 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 HVCN1Q96D96 273 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 SPDL1Q96EA4 605 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 TMEM60Q9H2L4 133 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 A8MXQ7 604 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 TTI1O43156 1089 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 SRGNP10124 158 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 GCKP35557 465 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 TRIM72Q6ZMU5 477 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 PARD3BQ8TEW8 1205 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 KIF12Q96FN5 646 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 POLR1AO95602 1720 aaPredicted RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 SLC16A3O15427 465 aaKnown RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 RPSAP08865 295 aaKnown RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 IL1RL1Q01638 556 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 FAM47EQ6ZV65 393 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 C1orf54Q8WWF1 131 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 DHX38Q92620 1227 aaKnown RBP19.36■□□□□ 0.69
COL18A1-204ENST00000400337 JMJD4Q9H9V9 463 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 STAP1Q9ULZ2 295 aa19.36■□□□□ 0.69
COL18A1-204ENST00000400337 ADAMTS13Q76LX8 1427 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 PFASO15067 1338 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 ASB14A6NK59 587 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 EFNA5P52803 228 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 GPS1Q13098 491 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 KLC3Q6P597 504 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 CHMP6Q96FZ7 201 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TUBB6Q9BUF5 446 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 KCNF1Q9H3M0 494 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TAF1DQ9H5J8 278 aaPredicted RBP19.35■□□□□ 0.69
COL18A1-204ENST00000400337 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 F5H423 210 aaPredicted RBP19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TBX3O15119 743 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 KRT38O76015 456 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 LUC7L3O95232 432 aaKnown RBP19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TMEM143Q96AN5 459 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 CYP26B1Q9NR63 512 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 AGPAT5Q9NUQ2 364 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms