RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SPDYAQ5MJ70 313 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 CEP70Q8NHQ1 597 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 NEK9Q8TD19 979 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 GIPC2Q8TF65 315 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 COL15A1P39059 1388 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 BTBD8Q5XKL5 378 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 NFRKBQ6P4R8 1299 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 PITPNM3Q9BZ71 974 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 TOPORSQ9NS56 1045 aaPredicted RBP14.63□□□□□ -0.07
VAPA-202ENST00000400000 KCNH4Q9UQ05 1017 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 PZPP20742 1482 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 NR1D1P20393 614 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 SULT1E1P49888 294 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 JAK3P52333 1124 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 EPM2AIP1Q7L775 607 aaPredicted RBP14.63□□□□□ -0.07
VAPA-202ENST00000400000 TRIML2Q8N7C3 387 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 RNF149Q8NC42 400 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 TTC8Q8TAM2 541 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ACOT2P49753 483 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ENOX1Q8TC92 643 aaKnown RBP14.63□□□□□ -0.07
VAPA-202ENST00000400000 VPS39Q96JC1 886 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 GOLPH3LQ9H4A5 285 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 FGFR1OP2Q9NVK5 253 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 RGL1Q9NZL6 768 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ARHGEF37A1IGU5 675 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 ETFBP38117 255 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 KCNH2Q12809 1159 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 SURF1Q15526 300 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 E2F4Q16254 413 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 ZNF564Q8TBZ8 553 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 AIPL1Q9NZN9 384 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 TADA2AO75478 443 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 KIZQ2M2Z5 673 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 FOXP4Q8IVH2 680 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 TXNRD1Q16881 649 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 HIBCHQ6NVY1 386 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 RAD54LQ92698 747 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 PBRM1Q86U86 1689 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 RPS6KA4O75676 772 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 FTLP02792 175 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 ZBED8Q8IZ13 594 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 SRPK1Q96SB4 655 aaKnown RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 RRP15Q9Y3B9 282 aaKnown RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 hCG_2014768A0A024R1R8 64 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 KBTBD13C9JR72 458 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 TFRCP02786 760 aaKnown RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 SLC8A1P32418 973 aa14.62□□□□□ -0.07
VAPA-202ENST00000400000 SPATA2LQ8IUW3 424 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 CNOT7Q9UIV1 285 aaKnown RBP14.62□□□□□ -0.07
VAPA-202ENST00000400000 PAN2Q504Q3 1202 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 HEATR6Q6AI08 1181 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 IFNLR1Q8IU57 520 aaPredicted RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 CCDC33Q8N5R6 958 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 SYT2Q8N9I0 419 aaPredicted RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 CCHCR1Q8TD31 782 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 CPA5Q8WXQ8 436 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 NLRP1Q9C000 1473 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 MMEP08473 750 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 KCNA2P16389 499 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 PDIA2Q13087 525 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 RESTQ13127 1097 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 PDCLQ13371 301 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 APOBEC3FQ8IUX4 373 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 SLC25A41Q8N5S1 370 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 ING2Q9H160 280 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 MED4Q9NPJ6 270 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 TXNP10599 105 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 AMHR2Q16671 573 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 NUP93Q8N1F7 819 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 TRIM55Q9BYV6 548 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 UPF3AQ9H1J1 476 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 TJP2Q9UDY2 1190 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 RSPH10B2B2RC85 870 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 ZRANB2O95218 330 aaKnown RBP eCLIP14.61□□□□□ -0.072e-6■■□□□ 11.6
VAPA-202ENST00000400000 LDHAP00338 332 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 RSPH10BP0C881 870 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 SESN2P58004 480 aaPredicted RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 DRAP1Q14919 205 aaPredicted RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 NSUN6Q8TEA1 469 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 EIF2AK1Q9BQI3 630 aaKnown RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 ADGRA2Q96PE1 1338 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 A0A1W2PQ27 194 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 A0A1W2PQ64 194 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 A0A1W2PQD8 194 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 PGBD4Q96DM1 585 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 GCOM2Q9BZD3 368 aaPredicted RBP14.61□□□□□ -0.07
VAPA-202ENST00000400000 UNC45AQ9H3U1 944 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 KDM5DQ9BY66 1539 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 FOXN1O15353 648 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 SDC4P31431 198 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 CHRNA3P32297 505 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 ZBED6P86452 979 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 DRC3Q9H069 523 aa14.61□□□□□ -0.07
VAPA-202ENST00000400000 GPBP1L1Q9HC44 474 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms