RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 PARD3Q8TEW0 1356 aa11.82□□□□□ -0.52
CACNA1C-208ENST00000399601 RALGAPBQ86X10 1494 aa11.82□□□□□ -0.52
CACNA1C-208ENST00000399601 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 C5orf58C9J3I9 102 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 HUS1O60921 280 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 S100A5P33763 92 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 SPDYAQ5MJ70 313 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 YME1L1Q96TA2 773 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 WBP11Q9Y2W2 641 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 GUCY2CP25092 1073 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 PLTPP55058 493 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 RWDD2BP57060 319 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 GPSM2P81274 684 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 TOMM70O94826 608 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 GNA14O95837 355 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 KCNA2P16389 499 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 MRPS25P82663 173 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 RASGRF1Q13972 1273 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 LRRC31Q6UY01 552 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 FOXP4Q8IVH2 680 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 CCNYL1Q8N7R7 359 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 SIKE1Q9BRV8 207 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 SPRTNQ9H040 489 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 PPP2R3BQ9Y5P8 575 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 RAPGEF6Q8TEU7 1601 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 ERBB3P21860 1342 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 ABCD1P33897 745 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 BLIDQ8IZY5 108 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 IGFLR1Q9H665 355 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 GH2P01242 217 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 LRG1P02750 347 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 MAP4P27816 1152 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 MYL7Q01449 175 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 NFIL3Q16649 462 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 FAM167AQ96KS9 214 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 DDX50Q9BQ39 737 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 WDR11Q9BZH6 1224 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 MLXIPLQ9NP71 852 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 DTNAQ9Y4J8 743 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 PCDHA5Q9Y5H7 936 aa11.81□□□□□ -0.52
CACNA1C-208ENST00000399601 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 SFSWAPQ12872 951 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 C6orf118Q5T5N4 469 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 BABAM1Q9NWV8 329 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 SMARCA1P28370 1054 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 ALDH18A1P54886 795 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 COBLL1Q53SF7 1204 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 VPS37AQ8NEZ2 397 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 FSD1LQ9BXM9 530 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 POLR3AO14802 1390 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 E2F8A0AVK6 867 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 TRIM13O60858 407 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 HOXB7P09629 217 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 NCALDP61601 193 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 RPS7P62081 194 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 SGO2Q562F6 1265 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 KRT39Q6A163 491 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 POLG2Q9UHN1 485 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 PNMA8BQ9ULN7 279 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 NEURL1BA8MQ27 555 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 AREL1O15033 823 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 LRRN2O75325 713 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 TUBBP07437 444 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 MAPK4P31152 587 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 NR1H3Q13133 447 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 DYNC1I2Q13409 638 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 PLEKHA8Q96JA3 519 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 SEC31BQ9NQW1 1179 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 SCG2P13521 617 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 ATAD3BQ5T9A4 648 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 CCDC60Q8IWA6 550 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 MIER2Q8N344 545 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 VPS11Q9H270 941 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
CACNA1C-208ENST00000399601 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
CACNA1C-208ENST00000399601 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
CACNA1C-208ENST00000399601 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
CACNA1C-208ENST00000399601 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
CACNA1C-208ENST00000399601 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms