RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 URODP06132 367 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 HTR4Q13639 388 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 KIAA0319Q5VV43 1072 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 AGMOQ6ZNB7 445 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 URGCPQ8TCY9 931 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 HDAC7Q8WUI4 952 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 PGBD4Q96DM1 585 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 SHDQ96IW2 340 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 FDXACB1Q9BRP7 624 aaPredicted RBP20.33■□□□□ 0.85
UFD1-202ENST00000399523 LRRC2Q9BYS8 371 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 INO80BQ9C086 356 aaPredicted RBP20.33■□□□□ 0.85
UFD1-202ENST00000399523 DISC1Q9NRI5 854 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 KANSL3Q9P2N6 904 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 NCDNQ9UBB6 729 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 FBXO4Q9UKT5 387 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 DOCK6Q96HP0 2047 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 IGKV6-21A0A0C4DH24 114 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 C2CD2LO14523 706 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 NRP1O14786 923 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 EFEMP2O95967 443 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 C1RP00736 705 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 AK2P54819 239 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 UGCGQ16739 394 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 ZNF410Q86VK4 478 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 HERC2P3Q9BVR0 1158 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 RXFP1Q9HBX9 757 aa20.32■□□□□ 0.84
UFD1-202ENST00000399523 PRR5-ARHGAP8B1AHC4 643 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 LRRN2O75325 713 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 CIITAP33076 1130 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 AFF1P51825 1210 aaKnown RBP20.31■□□□□ 0.84
UFD1-202ENST00000399523 ARHGAP8P85298 464 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 PRR16Q569H4 304 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 APOA5Q6Q788 366 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 SYNE3Q6ZMZ3 975 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 TAS1R1Q7RTX1 841 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 MRPL10Q7Z7H8 261 aaKnown RBP20.31■□□□□ 0.84
UFD1-202ENST00000399523 RNF168Q8IYW5 571 aaPredicted RBP20.31■□□□□ 0.84
UFD1-202ENST00000399523 LENG9Q96B70 501 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 FAM193BQ96PV7 902 aaPredicted RBP20.31■□□□□ 0.84
UFD1-202ENST00000399523 DDX23Q9BUQ8 820 aaKnown RBP20.31■□□□□ 0.84
UFD1-202ENST00000399523 NIFKQ9BYG3 293 aaKnown RBP20.31■□□□□ 0.84
UFD1-202ENST00000399523 PLEKHA4Q9H4M7 779 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 PCDHB2Q9Y5E7 798 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 PCDHGA2Q9Y5H1 932 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 NUMBLQ9Y6R0 609 aa20.31■□□□□ 0.84
UFD1-202ENST00000399523 DNM2P50570 870 aa20.3■□□□□ 0.84
UFD1-202ENST00000399523 LMNB2Q03252 620 aa20.3■□□□□ 0.84
UFD1-202ENST00000399523 NT5C3AQ9H0P0 336 aa20.3■□□□□ 0.84
UFD1-202ENST00000399523 MARCH5Q9NX47 278 aa20.3■□□□□ 0.84
UFD1-202ENST00000399523 ZDHHC7Q9NXF8 308 aa20.3■□□□□ 0.84
UFD1-202ENST00000399523 ZFP37Q9Y6Q3 630 aaPredicted RBP20.3■□□□□ 0.84
UFD1-202ENST00000399523 PATJQ8NI35 1801 aa20.3■□□□□ 0.84
UFD1-202ENST00000399523 CNTNAP2Q9UHC6 1331 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 KANSL1LA0AUZ9 987 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 ADAMTS3O15072 1205 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 SFNP31947 248 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 GLUD2P49448 558 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 GPC5P78333 572 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 RTN1Q16799 776 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 CATSPER4Q7RTX7 472 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 ZBTB44Q8NCP5 570 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 RTKNQ9BST9 563 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 BCO2Q9BYV7 579 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 RSAD1Q9HA92 442 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 PIDD1Q9HB75 910 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 SPATA6Q9NWH7 488 aaPredicted RBP20.29■□□□□ 0.84
UFD1-202ENST00000399523 MYH15Q9Y2K3 1946 aa20.29■□□□□ 0.84
UFD1-202ENST00000399523 ESYT2A0FGR8 921 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 SLC27A2O14975 620 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 LAMTOR5O43504 91 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 STBD1O95210 358 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 MYBP10242 640 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 DSG1Q02413 1049 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 GET4Q7L5D6 327 aaPredicted RBP20.28■□□□□ 0.84
UFD1-202ENST00000399523 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 ATRIPQ8WXE1 791 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 NELL1Q92832 810 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 SECISBP2LQ93073 1101 aaKnown RBP20.28■□□□□ 0.84
UFD1-202ENST00000399523 RIT2Q99578 217 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 RPP25Q9BUL9 199 aaKnown RBP20.28■□□□□ 0.84
UFD1-202ENST00000399523 OSBPL6Q9BZF3 934 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 PRKD2Q9BZL6 878 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 ZMYND12Q9H0C1 365 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 AGPAT5Q9NUQ2 364 aa20.28■□□□□ 0.84
UFD1-202ENST00000399523 SUCLA2Q9P2R7 463 aaPredicted RBP20.28■□□□□ 0.84
UFD1-202ENST00000399523 CDV3Q9UKY7 258 aaKnown RBP20.28■□□□□ 0.84
UFD1-202ENST00000399523 CNOT1A5YKK6 2376 aaKnown RBP20.27■□□□□ 0.84
UFD1-202ENST00000399523 GAS2O43903 313 aaKnown RBP20.27■□□□□ 0.84
UFD1-202ENST00000399523 LILRB5O75023 590 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 POMCP01189 267 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 SPATA31D3P0C874 917 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 TGM1P22735 817 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 JAK3P52333 1124 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 ST3GAL2Q16842 350 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 PFKFB3Q16875 520 aaPredicted RBP20.27■□□□□ 0.84
UFD1-202ENST00000399523 MTERF2Q49AM1 385 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 XKR3Q5GH77 459 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 SPATA31D4Q6ZUB0 917 aa20.27■□□□□ 0.84
UFD1-202ENST00000399523 RHPN2Q8IUC4 686 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms