RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 MTM1Q13496 603 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 KCTD21Q4G0X4 260 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 FBXL16Q8N461 479 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 NSL1Q96IY1 281 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 MAGEB18Q96M61 343 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 INPP4AQ96PE3 977 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 TRAPPC9Q96Q05 1148 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 CDC42EP4Q9H3Q1 356 aaKnown RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 EPB41L4AQ9HCS5 686 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 NMRK1Q9NWW6 199 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 CTNNAL1Q9UBT7 734 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 BCS1LQ9Y276 419 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 FRMPD2Q68DX3 1309 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 SFI1A8K8P3 1242 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 NDC80O14777 642 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 KRT36O76013 467 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 LINGO3P0C6S8 592 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 RARGP13631 454 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 MAN1A1P33908 653 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 PCYT1AP49585 367 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ADARP55265 1226 aaKnown RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 BFSP1Q12934 665 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 KIF22Q14807 665 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 DRAP1Q14919 205 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 HLFQ16534 295 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 WASHC2DQ5SRD0 308 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ZNF662Q6ZS27 426 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ANO5Q75V66 913 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ZBTB38Q8NAP3 1195 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ZCRB1Q8TBF4 217 aaKnown RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 UCMAQ8WVF2 138 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 WDR60Q8WVS4 1066 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 SERPINB12Q96P63 405 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ATXN10Q9UBB4 475 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 MARCOQ9UEW3 520 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ZBTB21Q9ULJ3 1066 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 MAP2P11137 1827 aaKnown RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 PCDH11XQ9BZA7 1347 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 E9PMD0 336 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 PLA2G4BP0C869 781 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 PHKG2P15735 406 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 BBS9Q3SYG4 887 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 LGSNQ5TDP6 509 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 SLC25A41Q8N5S1 370 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ATXN2LQ8WWM7 1075 aaKnown RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ZNF184Q99676 751 aaPredicted RBP9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ASAP1Q9ULH1 1129 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 ALG6Q9Y672 507 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 VWDEQ8N2E2 1590 aa9.93□□□□□ -0.82
COL28A1-201ENST00000399429 CCDC195A0A1B0GUA6 201 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 F8W031 263 aaPredicted RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CLDN3O15551 220 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 PJA2O43164 708 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 RIPK2O43353 540 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 HNRNPCL1O60812 293 aaKnown RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 MYL7Q01449 175 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ANO7Q6IWH7 933 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 GJB7Q6PEY0 223 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 FAM13CQ8NE31 585 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 SREK1Q8WXA9 508 aaKnown RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CNKSR1Q969H4 720 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CCDC127Q96BQ5 260 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 SNF8Q96H20 258 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 MKNK1Q9BUB5 465 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 FAM192AQ9GZU8 254 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 GINM1Q9NU53 330 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CPS1P31327 1500 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 MROH5Q6ZUA9 1318 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 KDM3AQ9Y4C1 1321 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 TOM1L1O75674 476 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 KCNA6P17658 529 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ALDH18A1P54886 795 aaKnown RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 BNIP1Q12981 228 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CNGA3Q16281 694 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 LVRNQ6Q4G3 990 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 TPH2Q8IWU9 490 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 PYROXD1Q8WU10 500 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 PPWD1Q96BP3 646 aaKnown RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 COA7Q96BR5 231 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 C7orf25Q9BPX7 421 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 SYT15Q9BQS2 421 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 NPHP3-ACAD11A0A0J9YXS1 232 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ZBED4O75132 1171 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 MMP13P45452 471 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 TPD52P55327 224 aaPredicted RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 NR1H3Q13133 447 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CTTNQ14247 550 aaKnown RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 STAT4Q14765 748 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ALX1Q15699 326 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 DCUN1D2Q6PH85 259 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 BTNL9Q6UXG8 535 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ZNF571Q7Z3V5 609 aaPredicted RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 ZBED8Q8IZ13 594 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 RIBC1Q8N443 379 aaPredicted RBP9.92□□□□□ -0.82
COL28A1-201ENST00000399429 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 RSAD2Q8WXG1 361 aa9.92□□□□□ -0.82
COL28A1-201ENST00000399429 CATSPER2Q96P56 530 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms