RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 OLFML3Q9NRN5 406 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 C6orf203Q9P0P8 240 aaPredicted RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 EIF4E1BA6NMX2 242 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 FAM107AO95990 144 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 PHKA2P46019 1235 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 NME3Q13232 169 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 RMDN1Q96DB5 314 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 DHX36Q9H2U1 1008 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 IP6K2Q9UHH9 426 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 FBXO2Q9UK22 296 aaPredicted RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 PNMA3Q9UL41 463 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 PRAG1Q86YV5 1406 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 TOMM70O94826 608 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 PDE8BO95263 885 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 KCNA6P17658 529 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 CDC25AP30304 524 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 ARL4DP49703 201 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 MAPK6Q16659 721 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 SCFD1Q8WVM8 642 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 POLE3Q9NRF9 147 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 CEP72Q9P209 647 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 CCDC15Q0P6D6 951 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 TRADDQ15628 312 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 SPDYAQ5MJ70 313 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 ARMC2Q8NEN0 867 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 AGR3Q8TD06 166 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 ZNF235Q14590 738 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 TMEM270Q6UE05 265 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 CLEC4FQ8N1N0 589 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 ATP11CQ8NB49 1132 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 INPP5DQ92835 1189 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 TADA1Q96BN2 335 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 FAM167AQ96KS9 214 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 UNC45AQ9H3U1 944 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 GREM2Q9H772 168 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 DMAP1Q9NPF5 467 aaPredicted RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 DDX56Q9NY93 547 aaKnown RBP12.32□□□□□ -0.44
HLCS-202ENST00000399120 FAM135BQ49AJ0 1406 aa12.32□□□□□ -0.44
HLCS-202ENST00000399120 SFI1A8K8P3 1242 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 MFAP3LO75121 409 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 SYTL3Q4VX76 610 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 LVRNQ6Q4G3 990 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PNMA6FA0A0J9YX94 578 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 MYO1GB0I1T2 1018 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 CENPAP49450 140 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 ACTN3Q08043 901 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 PKP1Q13835 747 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 C16orf72Q14CZ0 275 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 ZBED8Q8IZ13 594 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 GIMAP8Q8ND71 665 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 BLOC1S6Q9UL45 172 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 DUOX2Q9NRD8 1548 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 RALBP11234 206 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 ADORA1P30542 326 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 HOXA13P31271 388 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 SERPINB4P48594 390 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 GUCY1A3Q02108 690 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 CENPPQ6IPU0 288 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 YAF2Q8IY57 180 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 GRAMD1AQ96CP6 724 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 FOPNLQ96NB1 174 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 NUP85Q9BW27 656 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 FAM129AQ9BZQ8 928 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 WWP1Q9H0M0 922 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PRG3Q9Y2Y8 225 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 PRPF3O43395 683 aaKnown RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 ASMTLO95671 621 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 PNMA6AP0CW24 399 aaPredicted RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 PYGMP11217 842 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 HSPA2P54652 639 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 CAPRIN2Q6IMN6 1127 aaKnown RBP12.31□□□□□ -0.44
HLCS-202ENST00000399120 SARM1Q6SZW1 724 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 BBS7Q8IWZ6 715 aa12.31□□□□□ -0.44
HLCS-202ENST00000399120 LINC00301Q8NCQ3 95 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms