RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LINC00301Q8NCQ3 95 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 IFT74Q96LB3 600 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CWH43Q9H720 699 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 BLOC1S4Q9NUP1 217 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 RWDD3Q9Y3V2 267 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 HES2Q9Y543 173 aa15.58■□□□□ 0.08
HLA-DQB1-202ENST00000399079 EDN1P05305 212 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 RB1P06400 928 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 AXLP30530 894 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PBX3P40426 434 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PEX3P56589 373 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NCBP1Q09161 790 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PPP2R5AQ15172 486 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ARSHQ5FYA8 562 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 AGMOQ6ZNB7 445 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZBTB8OSQ8IWT0 167 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KCTD17Q8N5Z5 321 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KLHL23Q8NBE8 558 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SMG8Q8ND04 991 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 DEPTORQ8TB45 409 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 C11orf84Q9BUA3 381 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CCDC113Q9H0I3 377 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 FZD8Q9H461 694 aa15.57■□□□□ 0.08
HLA-DQB1-202ENST00000399079 RALGAPA2Q2PPJ7 1873 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 A0A1B0GUA9 196 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CCDC169A6NNP5 214 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ITGB1P05556 798 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SKIP12755 728 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PDIA4P13667 645 aaKnown RBP15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 GUCY2CP25092 1073 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NPTX2P47972 431 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MCM6Q14566 821 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 STK38Q15208 465 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MAPK6Q16659 721 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MRPL10Q7Z7H8 261 aaKnown RBP15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KRI1Q8N9T8 703 aaKnown RBP15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SLC17A8Q8NDX2 589 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZNF396Q96N95 335 aaPredicted RBP15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PLVAPQ9BX97 442 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 C2orf40Q9H1Z8 148 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PRMT7Q9NVM4 692 aaPredicted RBP15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 LMCD1Q9NZU5 365 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PLAGL2Q9UPG8 496 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 INPP5FQ9Y2H2 1132 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 IPPQ9Y573 584 aa15.56■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KIAA1671Q9BY89 1806 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SPTLC2O15270 562 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SLC26A4O43511 780 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 OFD1O75665 1012 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PRKCBP05771 671 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 DNAJB1P25685 340 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SKIV2LQ15477 1246 aaKnown RBP15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 FAM187BQ17R55 369 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 LRRC43Q8N309 656 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 COLGALT1Q8NBJ5 622 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 RAD54LQ92698 747 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 P2RX5Q93086 422 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MRPL38Q96DV4 380 aaKnown RBP15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PRIMPOLQ96LW4 560 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 DRC1Q96MC2 740 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PANK2Q9BZ23 570 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZDHHC9Q9Y397 364 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MYO7AQ13402 2215 aa15.55■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CNTNAP2Q9UHC6 1331 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NPTXRO95502 500 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NCLP19338 710 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 DMP1Q13316 513 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PRPF4BQ13523 1007 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CAMK1Q14012 370 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 GLB1LQ6UWU2 654 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 GPBP1Q86WP2 473 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SPPL3Q8TCT6 385 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 LARP4BQ92615 738 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PGBD4Q96DM1 585 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CHAMP1Q96JM3 812 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 APOL6Q9BWW8 343 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 TRIM6Q9C030 488 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NXF3Q9H4D5 531 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 RSAD1Q9HA92 442 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KMT5AQ9NQR1 393 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 TBC1D13Q9NVG8 400 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PCDHB12Q9Y5F1 795 aa15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MORC2Q9Y6X9 1032 aaPredicted RBP15.54■□□□□ 0.08
HLA-DQB1-202ENST00000399079 K7ERI5 159 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ACKR2O00590 384 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 SLC16A4O15374 487 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 DDIT3P35638 169 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 EFNA5P52803 228 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 DNM1Q05193 864 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PTPROQ16827 1216 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NAALADL2Q58DX5 795 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NOMO2Q5JPE7 1267 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KCNT2Q6UVM3 1135 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms