RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ACER1Q8TDN7 264 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 SLC20A1Q8WUM9 679 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 ARHGEF10LQ9HCE6 1279 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 ZDHHC18Q9NUE0 388 aa27.64■■■□□ 2.02
COL13A1-203ENST00000398969 ARHGEF35A5YM69 484 aa27.64■■■□□ 2.01
COL13A1-203ENST00000398969 VCAM1P19320 739 aa27.64■■■□□ 2.01
COL13A1-203ENST00000398969 HADHBP55084 474 aaKnown RBP27.64■■■□□ 2.01
COL13A1-203ENST00000398969 MAGOHP61326 146 aaKnown RBP27.64■■■□□ 2.01
COL13A1-203ENST00000398969 RHOT2Q8IXI1 618 aa27.64■■■□□ 2.01
COL13A1-203ENST00000398969 C3orf20Q8ND61 904 aa27.64■■■□□ 2.01
COL13A1-203ENST00000398969 MAGOHBQ96A72 148 aaKnown RBP27.64■■■□□ 2.01
COL13A1-203ENST00000398969 EHMT1Q9H9B1 1298 aa27.64■■■□□ 2.01
COL13A1-203ENST00000398969 MYH11P35749 1972 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 BCRP11274 1271 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 DLG4P78352 724 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 CXCL9Q07325 125 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 MYBPC2Q14324 1141 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 CLUL1Q15846 466 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 SPDYE2Q495Y8 402 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 C6orf89Q6UWU4 347 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 PRPF38AQ8NAV1 312 aaKnown RBP27.63■■■□□ 2.01
COL13A1-203ENST00000398969 FAM151AQ8WW52 585 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 TEKT3Q9BXF9 490 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 RANBP17Q9H2T7 1088 aaKnown RBP27.63■■■□□ 2.01
COL13A1-203ENST00000398969 TMOD4Q9NZQ9 345 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 HERC5Q9UII4 1024 aaKnown RBP27.63■■■□□ 2.01
COL13A1-203ENST00000398969 ALG6Q9Y672 507 aa27.63■■■□□ 2.01
COL13A1-203ENST00000398969 FAM187AA6NFU0 413 aa27.62■■■□□ 2.01
COL13A1-203ENST00000398969 PAEPP09466 180 aa27.62■■■□□ 2.01
COL13A1-203ENST00000398969 GLG1Q92896 1179 aa27.62■■■□□ 2.01
COL13A1-203ENST00000398969 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.62■■■□□ 2.01
COL13A1-203ENST00000398969 TMX2Q9Y320 296 aa27.62■■■□□ 2.01
COL13A1-203ENST00000398969 KRT13P13646 458 aa27.62■■■□□ 2.01
COL13A1-203ENST00000398969 EIF3BP55884 814 aaKnown RBP27.62■■■□□ 2.01
COL13A1-203ENST00000398969 SETQ01105 290 aaPredicted RBP27.62■■■□□ 2.01
COL13A1-203ENST00000398969 DHX34Q14147 1143 aaKnown RBP27.62■■■□□ 2.01
COL13A1-203ENST00000398969 UBE2TQ9NPD8 197 aaPredicted RBP27.62■■■□□ 2.01
COL13A1-203ENST00000398969 EMSYQ7Z589 1322 aa27.62■■■□□ 2.01
COL13A1-203ENST00000398969 K7ENM7 598 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 HNRNPH1P31943 449 aaKnown RBP27.61■■■□□ 2.01
COL13A1-203ENST00000398969 IFFO1Q0D2I5 559 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 IFT88Q13099 833 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 C11orf63Q6NUN7 778 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 ARHGEF19Q8IW93 802 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 KCNV1Q6PIU1 500 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 JAMLQ86YT9 394 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 MTMR14Q8NCE2 650 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 TAOK3Q9H2K8 898 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 GOPCQ9HD26 462 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 BCS1LQ9Y276 419 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 MRPL11Q9Y3B7 192 aaKnown RBP27.61■■■□□ 2.01
COL13A1-203ENST00000398969 CNTNAP1P78357 1384 aa27.61■■■□□ 2.01
COL13A1-203ENST00000398969 IPO5O00410 1097 aaKnown RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 RNF187Q5TA31 235 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 AADACL2Q6P093 401 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 INTS8Q75QN2 995 aaKnown RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 TLCD1Q96CP7 247 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 EPB41L4BQ9H329 900 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 CTTNBP2NLQ9P2B4 639 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 MIF4GDA9UHW6 222 aaKnown RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 FTLP02792 175 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 TCEAL1Q15170 157 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 PADI6Q6TGC4 694 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 RAPGEF5Q92565 580 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 PCIF1Q9H4Z3 704 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 PPP1R1BQ9UD71 204 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 DDX20Q9UHI6 824 aaKnown RBP27.6■■■□□ 2.01
COL13A1-203ENST00000398969 SYNGAP1Q96PV0 1343 aa27.6■■■□□ 2.01
COL13A1-203ENST00000398969 TISP43B9A030 160 aa27.59■■■□□ 2.01
COL13A1-203ENST00000398969 KIAA0391O15091 583 aaKnown RBP27.59■■■□□ 2.01
COL13A1-203ENST00000398969 PPP3CAQ08209 521 aa27.59■■■□□ 2.01
COL13A1-203ENST00000398969 PFASO15067 1338 aa27.59■■■□□ 2.01
COL13A1-203ENST00000398969 LOXHD1Q8IVV2 1947 aa27.59■■■□□ 2.01
COL13A1-203ENST00000398969 VAMP7P51809 220 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 DRG2P55039 364 aaKnown RBP27.58■■■□□ 2.01
COL13A1-203ENST00000398969 FKBP1CQ5VVH2 108 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 ZDHHC24Q6UX98 284 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 KRT35Q92764 455 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 VEZTQ9HBM0 779 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 FER1L6Q2WGJ9 1857 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 H0YHG0 523 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 PHF2O75151 1096 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 NUDT17P0C025 328 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 QPCTQ16769 361 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 EPC2Q52LR7 807 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 MAEAQ7L5Y9 396 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 UBL4BQ8N7F7 174 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 VTI1AQ96AJ9 217 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 RIT2Q99578 217 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 RASAL2Q9UJF2 1139 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 SNX24Q9Y343 169 aa27.58■■■□□ 2.01
COL13A1-203ENST00000398969 BRCA1P38398 1863 aaKnown RBP27.58■■■□□ 2.01
COL13A1-203ENST00000398969 DDX39AO00148 427 aaKnown RBP27.57■■■□□ 2
COL13A1-203ENST00000398969 PTGIRP43119 386 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 MARCKSL1P49006 195 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 CETN1Q12798 172 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 CIAPIN1Q6FI81 312 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 RPUSD2Q8IZ73 545 aaKnown RBP27.57■■■□□ 2
COL13A1-203ENST00000398969 NEK9Q8TD19 979 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms