RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 CLDN3O15551 220 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 MMEP08473 750 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SESN3P58005 492 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 RHBDL3P58872 404 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 R3HDM1Q15032 1099 aaKnown RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 CCDC137Q6PK04 289 aaKnown RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SLC20A1Q8WUM9 679 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 ZDHHC15Q96MV8 337 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 GLIS2Q9BZE0 524 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 OSGEPQ9NPF4 335 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 DBR1Q9UK59 544 aaKnown RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 ZNRF3Q9ULT6 936 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 P4HA1P13674 534 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 KCNJ6P48051 423 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 CFAP157Q5JU67 520 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 VSIG1Q86XK7 387 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 LRRC71Q8N4P6 559 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 RNPC3Q96LT9 517 aaKnown RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 VCPKMTQ9H867 229 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 RPF1Q9H9Y2 349 aaKnown RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 FAM198AQ9UFP1 575 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 MAN1A1P33908 653 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 CLUL1Q15846 466 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SNRNP35Q16560 246 aaKnown RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 MUM1L1Q5H9M0 696 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 CCNI2Q6ZMN8 369 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 MAIP1Q8WWC4 291 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SPATA33Q96N06 139 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 L2HGDHQ9H9P8 463 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 JPH1Q9HDC5 661 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SAYSD1Q9NPB0 183 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 GPC3P51654 580 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 IRX4P78413 519 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 ATP11AP98196 1134 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 GKAP1Q5VSY0 366 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 ZIM3Q96PE6 472 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 TAF1DQ9H5J8 278 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 RBAKQ9NYW8 714 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 ADAM22Q9P0K1 906 aa9.74□□□□□ -0.85
SEC24A-202ENST00000398844 TRPM3Q9HCF6 1732 aaPredicted RBP9.74□□□□□ -0.85
SEC24A-202ENST00000398844 SLC16A3O15427 465 aaKnown RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 MYL3P08590 195 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 RPA1P27694 616 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 SLC12A3P55017 1021 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 TFDP1Q14186 410 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ZNF568Q3ZCX4 644 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 STYK1Q6J9G0 422 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 AADACL2Q6P093 401 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ZNF571Q7Z3V5 609 aaPredicted RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 PRMT1Q99873 361 aaKnown RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ADPGKQ9BRR6 497 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 TBC1D22BQ9NU19 505 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 BAZ2AQ9UIF9 1905 aaKnown RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 CAP2P40123 477 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 FUT2Q10981 343 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ANKMY2Q8IV38 441 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 NSUN6Q8TEA1 469 aaKnown RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 MMP19Q99542 508 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 TMEM117Q9H0C3 514 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 KRT17Q04695 432 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 E2F5Q15329 346 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 CYP4A22Q5TCH4 519 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 CBWD1Q9BRT8 395 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 AKAP3O75969 853 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 RPSAP08865 295 aaKnown RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 H2AFXP16104 143 aaPredicted RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 NAA25Q14CX7 972 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 PPP2R5AQ15172 486 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 LONRF1Q17RB8 773 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ZNF699Q32M78 642 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 SUPT20HL1Q3ZLR7 823 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 MIIPQ5JXC2 388 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 SPOPLQ6IQ16 392 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ERICH1Q86X53 443 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ELAC2Q9BQ52 826 aaKnown RBP9.73□□□□□ -0.85
SEC24A-202ENST00000398844 LRP6O75581 1613 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 KLRC4O43908 158 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 ARHGAP25P42331 645 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 TRIM68Q6AZZ1 485 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 C1orf228Q6PIY5 440 aa9.73□□□□□ -0.85
SEC24A-202ENST00000398844 CCDC195A0A1B0GUA6 201 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 GRID2IPA4D2P6 1211 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 TRIM66O15016 1216 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
SEC24A-202ENST00000398844 RPS6P62753 249 aaKnown RBP9.72□□□□□ -0.85
SEC24A-202ENST00000398844 PRKCEQ02156 737 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 CUL1Q13616 776 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 PPP1R13LQ8WUF5 828 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 DHX38Q92620 1227 aaKnown RBP9.72□□□□□ -0.85
SEC24A-202ENST00000398844 TNFRSF25Q93038 417 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 RILPQ96NA2 401 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 GINM1Q9NU53 330 aa9.72□□□□□ -0.85
SEC24A-202ENST00000398844 AGO2Q9UKV8 859 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms