RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 HOOK3Q86VS8 718 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 LMO3Q8TAP4 145 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 KAT2BQ92831 832 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 CYFIP2Q96F07 1278 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 PSMD1Q99460 953 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 RIT2Q99578 217 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 STRA6Q9BX79 667 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 GGA2Q9UJY4 613 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 COL2A1P02458 1487 aaPredicted RBP14.15□□□□□ -0.14
PRAME-201ENST00000398741 GOLGB1Q14789 3259 aaKnown RBP14.15□□□□□ -0.14
PRAME-201ENST00000398741 FTLP02792 175 aaPredicted RBP14.14□□□□□ -0.15
PRAME-201ENST00000398741 HSPA6P17066 643 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 HADHBP55084 474 aaKnown RBP14.14□□□□□ -0.15
PRAME-201ENST00000398741 GPC5P78333 572 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 IFT88Q13099 833 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 FBXW10Q5XX13 1052 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 DUPD1Q68J44 220 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 FAM160B2Q86V87 743 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 JAMLQ86YT9 394 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 ARHGEF19Q8IW93 802 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
PRAME-201ENST00000398741 DAW1Q8N136 415 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 C3orf20Q8ND61 904 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 ALG3Q92685 438 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 GLG1Q92896 1179 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 ACCSQ96QU6 501 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 MXRA8Q9BRK3 442 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 TULP1O00294 542 aaPredicted RBP14.14□□□□□ -0.15
PRAME-201ENST00000398741 P4HA2O15460 535 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 TRAPPC3O43617 180 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 PHF2O75151 1096 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 FSBPO95073 299 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 VCAM1P19320 739 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 GCLMP48507 274 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 PLTPP55058 493 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 SEL1L2Q5TEA6 688 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 B3GNT9Q6UX72 402 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 LDHDQ86WU2 507 aa14.14□□□□□ -0.15
PRAME-201ENST00000398741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRAME-201ENST00000398741 CLRN2A0PK11 232 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 MAPTP10636 758 aaKnown RBP14.13□□□□□ -0.15
PRAME-201ENST00000398741 CHRNA3P32297 505 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 PMS2P54278 862 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 DENND2CQ68D51 928 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 ZSWIM1Q9BR11 485 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 CNOT10Q9H9A5 744 aaKnown RBP14.13□□□□□ -0.15
PRAME-201ENST00000398741 CNOT8Q9UFF9 292 aaKnown RBP14.13□□□□□ -0.15
PRAME-201ENST00000398741 SNX24Q9Y343 169 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 DCDC2CA8MYV0 355 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 TISP43B9A030 160 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 P4HBP07237 508 aaKnown RBP14.13□□□□□ -0.15
PRAME-201ENST00000398741 PPP3CAQ08209 521 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 STYK1Q6J9G0 422 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 ZNF746Q6NUN9 644 aaPredicted RBP14.13□□□□□ -0.15
PRAME-201ENST00000398741 CCDC121Q6ZUS5 278 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 CNPY4Q8N129 248 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 XXYLT1Q8NBI6 393 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 CBWD1Q9BRT8 395 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 TXLNGYQ9BZA5 131 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 ZDHHC18Q9NUE0 388 aa14.13□□□□□ -0.15
PRAME-201ENST00000398741 SLX4Q8IY92 1834 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 RTN2O75298 545 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 PAEPP09466 180 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 GBP1P32455 592 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 MXI1P50539 228 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 MESDQ14696 234 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 AADACL2Q6P093 401 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 ARMC9Q7Z3E5 817 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 SUGP1Q8IWZ8 645 aaKnown RBP14.12□□□□□ -0.15
PRAME-201ENST00000398741 RAPGEF5Q92565 580 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 KRT35Q92764 455 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 C18orf8Q96DM3 657 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 PABPC3Q9H361 631 aaKnown RBP14.12□□□□□ -0.15
PRAME-201ENST00000398741 HSPBP1Q9NZL4 362 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 MTRF1LQ9UGC7 380 aaKnown RBP14.12□□□□□ -0.15
PRAME-201ENST00000398741 PARP2Q9UGN5 583 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
PRAME-201ENST00000398741 PODXLO00592 558 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 KIAA0391O15091 583 aaKnown RBP14.11□□□□□ -0.15
PRAME-201ENST00000398741 GGPS1O95749 300 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 NUDT17P0C025 328 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 PLS3P13797 630 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 ITGB5P18084 799 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 COMTP21964 271 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 HNRNPH1P31943 449 aaKnown RBP14.11□□□□□ -0.15
PRAME-201ENST00000398741 GTF2A1P52655 376 aaPredicted RBP14.11□□□□□ -0.15
PRAME-201ENST00000398741 DRG2P55039 364 aaKnown RBP14.11□□□□□ -0.15
PRAME-201ENST00000398741 TCEAL1Q15170 157 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 GRIPAP1Q4V328 841 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
PRAME-201ENST00000398741 RPS6KC1Q96S38 1066 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 KCNH7Q9NS40 1196 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 FBXO28Q9NVF7 368 aa14.11□□□□□ -0.15
PRAME-201ENST00000398741 DDX20Q9UHI6 824 aaKnown RBP14.11□□□□□ -0.15
PRAME-201ENST00000398741 ZHX2Q9Y6X8 837 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms