RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GLT1D1Q96MS3 346 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 MYO5BQ9ULV0 1848 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 SSTR3P32745 418 aaPredicted RBP15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
PCDHA11-201ENST00000398640 SUN1O94901 812 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 CCT5P48643 541 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 DHX9Q08211 1270 aaKnown RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 POLR3FQ9H1D9 316 aaPredicted RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 SRPRBQ9Y5M8 271 aaKnown RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 ADGRB2O60241 1585 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 POTEMA6NI47 508 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 PDHXO00330 501 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 ZNF543Q08ER8 600 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 NME3Q13232 169 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 WHAMMQ8TF30 809 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 FAF2Q96CS3 445 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 USH1CQ9Y6N9 552 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 CFLARO15519 480 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 GGPS1O95749 300 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 THAP9Q9H5L6 903 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 ZNF609O15014 1411 aa15.21■□□□□ 0.03
PCDHA11-201ENST00000398640 MAP3K7O43318 606 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 P4HBP07237 508 aaKnown RBP15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 IL1R1P14778 569 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 GNASQ5JWF2 1037 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 KIAA1755Q5JYT7 1200 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 AKT1S1Q96B36 256 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 JRKLQ9Y4A0 524 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 TRIM17Q9Y577 477 aa15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 MAP2P11137 1827 aaKnown RBP15.21■□□□□ 0.02
PCDHA11-201ENST00000398640 SYNDIG1LA6NDD5 238 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 F8W8V4 182 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 PADI6Q6TGC4 694 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 FRA10AC1Q70Z53 315 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 BARHL2Q9NY43 387 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 PRR12Q9ULL5 1215 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 FAN1Q9Y2M0 1017 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 DCDC2CA8MYV0 355 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 PSMC5P62195 406 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 SUCLA2Q9P2R7 463 aaPredicted RBP15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 IPO5O00410 1097 aaKnown RBP15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 TRPA1O75762 1119 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 BACE1P56817 501 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 VEPH1Q14D04 833 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 SMARCAD1Q9H4L7 1026 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 SARS2Q9NP81 518 aaKnown RBP15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 DYRK4Q9NR20 520 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 PIN4Q9Y237 131 aaKnown RBP15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 ORC6Q9Y5N6 252 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 EXOC1LA0A1B0GW35 172 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 MYBP10242 640 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 LRRC31Q6UY01 552 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 MYL1P05976 194 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 CCNE1P24864 410 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 CDC25BP30305 580 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 IFT88Q13099 833 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 EPS15L1Q9UBC2 864 aa15.2■□□□□ 0.02
PCDHA11-201ENST00000398640 GOLGA8QA0A0J9YX86 632 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 GOLGA8OA6NCC3 632 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 GOLGA8NF8WBI6 632 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 STAT5BP51692 787 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 TMEM62Q0P6H9 643 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 DGKDQ16760 1214 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 FAM133BQ5BKY9 247 aaKnown RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 CLEC10AQ8IUN9 316 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 FSD1LQ9BXM9 530 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 PI4K2BG5E9Z4 385 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 PPARGP37231 505 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 PPP4CP60510 307 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 MROH8Q9H579 483 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 VGLL3A8MV65 326 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 STMN1P16949 149 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 IER5Q5VY09 327 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 PTF1AQ7RTS3 328 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 FAM83AQ86UY5 434 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 CCDC197Q8NCU1 140 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 M0QYV0 167 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 ZNF500O60304 480 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 DR1Q01658 176 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 MXD4Q14582 209 aaPredicted RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 SMAD1Q15797 465 aaKnown RBP15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 MAML1Q92585 1016 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 HEMGNQ9BXL5 484 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 GPRC5DQ9NZD1 345 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 SLC13A4Q9UKG4 626 aa15.19■□□□□ 0.02
PCDHA11-201ENST00000398640 STK36Q9NRP7 1315 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms