RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 KSR1Q8IVT5 923 aa28.13■■■□□ 2.09
U2AF1-203ENST00000398137 IQUBQ8NA54 791 aa28.13■■■□□ 2.09
U2AF1-203ENST00000398137 ASAP3Q8TDY4 903 aa28.13■■■□□ 2.09
U2AF1-203ENST00000398137 PRPF31Q8WWY3 499 aaKnown RBP28.13■■■□□ 2.09
U2AF1-203ENST00000398137 HPSEQ9Y251 543 aa28.13■■■□□ 2.09
U2AF1-203ENST00000398137 COL4A3BPQ9Y5P4 624 aa28.13■■■□□ 2.09
U2AF1-203ENST00000398137 NPHP3-ACAD11A0A0J9YXS1 232 aa28.12■■■□□ 2.09
U2AF1-203ENST00000398137 GPR182O15218 404 aa28.12■■■□□ 2.09
U2AF1-203ENST00000398137 GPC3P51654 580 aa28.12■■■□□ 2.09
U2AF1-203ENST00000398137 COL19A1Q14993 1142 aa28.12■■■□□ 2.09
U2AF1-203ENST00000398137 NLRP4Q96MN2 994 aa28.12■■■□□ 2.09
U2AF1-203ENST00000398137 RWDD3Q9Y3V2 267 aa28.12■■■□□ 2.09
U2AF1-203ENST00000398137 PLXNA4Q9HCM2 1894 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 FAM237AA0A1B0GTK4 181 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 HIP1RO75146 1068 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 STAG3L1P0CL83 205 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 ARL2P36404 184 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 FAM189BP81408 668 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 LAMTOR4Q0VGL1 99 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 TIGD5Q53EQ6 642 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 ARSHQ5FYA8 562 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 CLEC17AQ6ZS10 378 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 SV2BQ7L1I2 683 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 NLRP7Q8WX94 980 aa28.11■■■□□ 2.09
U2AF1-203ENST00000398137 C11orf84Q9BUA3 381 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-203ENST00000398137 GADD45BO75293 160 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-203ENST00000398137 GLRA2P23416 452 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 GUCY2CP25092 1073 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 DNAJB1P25685 340 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 SYKP43405 635 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 CACNB1Q02641 598 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-203ENST00000398137 MAPK7Q13164 816 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 SLC24A5Q71RS6 500 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 BSNDQ8WZ55 320 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 GBP4Q96PP9 640 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 PYM1Q9BRP8 204 aaKnown RBP28.1■■■□□ 2.09
U2AF1-203ENST00000398137 CUEDC2Q9H467 287 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 NSUN3Q9H649 340 aaKnown RBP28.1■■■□□ 2.09
U2AF1-203ENST00000398137 ALG13Q9NP73 1137 aaKnown RBP28.1■■■□□ 2.09
U2AF1-203ENST00000398137 C1orf112Q9NSG2 853 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 KCND2Q9NZV8 630 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 HCSTQ9UBK5 93 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 PLAGL2Q9UPG8 496 aa28.1■■■□□ 2.09
U2AF1-203ENST00000398137 DENND3A2RUS2 1198 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 KRT18P05783 430 aaKnown RBP28.09■■■□□ 2.09
U2AF1-203ENST00000398137 IBSPP21815 317 aaPredicted RBP28.09■■■□□ 2.09
U2AF1-203ENST00000398137 CAPSQ13938 189 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 MXD4Q14582 209 aaPredicted RBP28.09■■■□□ 2.09
U2AF1-203ENST00000398137 FAM43BQ6ZT52 329 aaPredicted RBP28.09■■■□□ 2.09
U2AF1-203ENST00000398137 DAW1Q8N136 415 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.09■■■□□ 2.09
U2AF1-203ENST00000398137 STAMQ92783 540 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 KIFAP3Q92845 792 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 PLVAPQ9BX97 442 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 RNF19AQ9NV58 838 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 PCDHB7Q9Y5E2 793 aa28.09■■■□□ 2.09
U2AF1-203ENST00000398137 A0A087WZ62 844 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 ACTN4O43707 911 aaKnown RBP28.08■■■□□ 2.09
U2AF1-203ENST00000398137 ITGB1P05556 798 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 SRGAP2CP0DJJ0 459 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 KCNA5P22460 613 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 EIF4BP23588 611 aaKnown RBP28.08■■■□□ 2.09
U2AF1-203ENST00000398137 LEXMQ3ZCV2 418 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 ODR4Q5SWX8 454 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 ZNF410Q86VK4 478 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 RNF149Q8NC42 400 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 P2RX5Q93086 422 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 DRC1Q96MC2 740 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 REEP2Q9BRK0 252 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 FDXACB1Q9BRP7 624 aaPredicted RBP28.08■■■□□ 2.09
U2AF1-203ENST00000398137 TIPINQ9BVW5 301 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 LMAN2LQ9H0V9 348 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 SERTAD1Q9UHV2 236 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 LRFN2Q9ULH4 789 aa28.08■■■□□ 2.09
U2AF1-203ENST00000398137 MYMKA6NI61 221 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 ASAP2O43150 1006 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 DARSP14868 501 aaKnown RBP28.07■■■□□ 2.08
U2AF1-203ENST00000398137 FGFR4P22455 802 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 CEP57L1Q8IYX8 460 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 ZNF710Q8N1W2 664 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 SPPL3Q8TCT6 385 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 BDP1A6H8Y1 2624 aa28.07■■■□□ 2.08
U2AF1-203ENST00000398137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.06■■■□□ 2.08
U2AF1-203ENST00000398137 PRPF40AO75400 957 aaKnown RBP28.06■■■□□ 2.08
U2AF1-203ENST00000398137 CSDE1O75534 798 aaKnown RBP28.06■■■□□ 2.08
U2AF1-203ENST00000398137 FGFR1P11362 822 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 CDC42EP1Q00587 391 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 TFDP1Q14186 410 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 DYMQ7RTS9 669 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 KLHL23Q8NBE8 558 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 TNMDQ9H2S6 317 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 MAGEF1Q9HAY2 307 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 KBTBD4Q9NVX7 518 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 TMEM161AQ9NX61 479 aa28.06■■■□□ 2.08
U2AF1-203ENST00000398137 LRRIQ4A6NIV6 560 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 SFI1A8K8P3 1242 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 SLFN14P0C7P3 912 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 LTBRP36941 435 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 HYAL1Q12794 435 aa28.05■■■□□ 2.08
U2AF1-203ENST00000398137 GIT2Q14161 759 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms