RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 UBXN11Q5T124 520 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 ANO5Q75V66 913 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 RNF168Q8IYW5 571 aaPredicted RBP18.07■□□□□ 0.48
CUX2-202ENST00000397643 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 RSAD2Q8WXG1 361 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 TMEM175Q9BSA9 504 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 RHOBTB2Q9BYZ6 727 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 MAN1C1Q9NR34 630 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 STK39Q9UEW8 545 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 FRYLO94915 3013 aa18.07■□□□□ 0.48
CUX2-202ENST00000397643 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 NRP1O14786 923 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 REC8O95072 547 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 PAPLNO95428 1278 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 TDP2O95551 362 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 SOD2P04179 222 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 CFHP08603 1231 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 PLA2G4FQ68DD2 849 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 TBCKQ8TEA7 893 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 BRF1Q92994 677 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 PGBD4Q96DM1 585 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 RNF26Q9BY78 433 aaPredicted RBP18.06■□□□□ 0.48
CUX2-202ENST00000397643 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 RSAD1Q9HA92 442 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 WDR6Q9NNW5 1121 aaKnown RBP18.06■□□□□ 0.48
CUX2-202ENST00000397643 MRPL17Q9NRX2 175 aaKnown RBP18.06■□□□□ 0.48
CUX2-202ENST00000397643 EPS15L1Q9UBC2 864 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 WNT16Q9UBV4 365 aa18.06■□□□□ 0.48
CUX2-202ENST00000397643 GPR179Q6PRD1 2367 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 CLUHO75153 1309 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 CYP3A7-CYP3A51PA0A087WV96 503 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 TEX28O15482 410 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 HMGB1P09429 215 aaKnown RBP18.05■□□□□ 0.48
CUX2-202ENST00000397643 CYP3A7P24462 503 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 HOXA11P31270 313 aaPredicted RBP18.05■□□□□ 0.48
CUX2-202ENST00000397643 Q6ZUG5 572 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 TAS1R1Q7RTX1 841 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 KCNB2Q92953 911 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 MBOAT7Q96N66 472 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 RPS6KC1Q96S38 1066 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 MYADMQ96S97 322 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 HERC2P3Q9BVR0 1158 aa18.05■□□□□ 0.48
CUX2-202ENST00000397643 CNTNAP2Q9UHC6 1331 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 C2CD2LO14523 706 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 RFPL2O75678 378 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 ALDH2P05091 517 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 C8orf34Q49A92 452 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 POTEGQ6S5H5 508 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 FBXL16Q8N461 479 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 SLC44A3Q8N4M1 653 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 ZNF707Q96C28 371 aaPredicted RBP18.04■□□□□ 0.48
CUX2-202ENST00000397643 RMDN1Q96DB5 314 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 AGXT2Q9BYV1 514 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 TBC1D17Q9HA65 648 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 DLGAP2Q9P1A6 1054 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 FAN1Q9Y2M0 1017 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 COL4A3BPQ9Y5P4 624 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 R4GN57 208 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 FANCMQ8IYD8 2048 aa18.04■□□□□ 0.48
CUX2-202ENST00000397643 CCDC195A0A1B0GUA6 201 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 DDX11L8A8MPP1 907 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 M0R2N6 131 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 INPPL1O15357 1258 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 POMCP01189 267 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 LMNAP02545 664 aaKnown RBP18.03■□□□□ 0.48
CUX2-202ENST00000397643 URODP06132 367 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 IFNAR1P17181 557 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
CUX2-202ENST00000397643 AK2P54819 239 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 FGD1P98174 961 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 KIAA0319Q5VV43 1072 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 COLGALT2Q8IYK4 626 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 ZNF579Q8NAF0 562 aaKnown RBP18.03■□□□□ 0.48
CUX2-202ENST00000397643 SMG8Q8ND04 991 aaKnown RBP18.03■□□□□ 0.48
CUX2-202ENST00000397643 SLC26A6Q9BXS9 759 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 SEMA4AQ9H3S1 761 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 RXFP1Q9HBX9 757 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 SH3GLB2Q9NR46 395 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 KANSL3Q9P2N6 904 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 CA14Q9ULX7 337 aa18.03■□□□□ 0.48
CUX2-202ENST00000397643 PRG3Q9Y2Y8 225 aaPredicted RBP18.03■□□□□ 0.48
CUX2-202ENST00000397643 F8W810 466 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 EML1O00423 815 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 GLUD1P00367 558 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 ADH1AP07327 375 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 SRFP11831 508 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 NCLP19338 710 aaKnown RBP18.02■□□□□ 0.48
CUX2-202ENST00000397643 NPEPPSP55786 919 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 PSMC5P62195 406 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 AKAP17AQ02040 695 aaKnown RBP18.02■□□□□ 0.48
CUX2-202ENST00000397643 DSC1Q08554 894 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 NPY5RQ15761 445 aa18.02■□□□□ 0.48
CUX2-202ENST00000397643 RIN2Q8WYP3 895 aaPredicted RBP18.02■□□□□ 0.48
CUX2-202ENST00000397643 DHX33Q9H6R0 707 aaKnown RBP18.02■□□□□ 0.48
CUX2-202ENST00000397643 WRAP73Q9P2S5 460 aaPredicted RBP18.02■□□□□ 0.48
CUX2-202ENST00000397643 CACNA1IQ9P0X4 2223 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 MED19A0JLT2 244 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms