RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 BOLA2-SMG1P6H3BVE0 249 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 APOL1O14791 398 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 THEGLP0DJG4 465 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 SOX18P35713 384 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 HNF4AP41235 474 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 PHC1P78364 1004 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 UBXN1Q04323 297 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 TRPC3Q13507 836 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 TSTQ16762 297 aaKnown RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 LIN54Q6MZP7 749 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 CCBE1Q6UXH8 406 aaPredicted RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 B4GALNT4Q76KP1 1039 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 ZNF619Q8N2I2 560 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 TAF4BQ92750 862 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 ZUFSPQ96AP4 578 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 NSUN5Q96P11 429 aaKnown RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 C2orf40Q9H1Z8 148 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 KCTD10Q9H3F6 313 aa7.53□□□□□ -1.2
SMCO1-201ENST00000397537 ADD3Q9UEY8 706 aaKnown RBP7.53□□□□□ -1.2
SMCO1-201ENST00000397537 ZC3H13Q5T200 1668 aaKnown RBP7.52□□□□□ -1.2
SMCO1-201ENST00000397537 SYT5O00445 386 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 PTP4A3O75365 173 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 FSBPO95073 299 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 MAPK4P31152 587 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 SMAD3P84022 425 aaKnown RBP7.52□□□□□ -1.2
SMCO1-201ENST00000397537 PPARDQ03181 441 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 SEMA3AQ14563 771 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 PPA1Q15181 289 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 ATP2B3Q16720 1220 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 KRTCAP3Q53RY4 240 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 ALKBH5Q6P6C2 394 aaKnown RBP7.52□□□□□ -1.2
SMCO1-201ENST00000397537 ARHGEF39Q8N4T4 335 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 PCDH19Q8TAB3 1148 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 RUFY2Q8WXA3 655 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 SSH1Q8WYL5 1049 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 CNDP2Q96KP4 475 aaKnown RBP7.52□□□□□ -1.2
SMCO1-201ENST00000397537 KCNC2Q96PR1 638 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 C7orf25Q9BPX7 421 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 BRIP1Q9BX63 1249 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 STK33Q9BYT3 514 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 NKX2-4Q9H2Z4 354 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 WHRNQ9P202 907 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 CGGBP1Q9UFW8 167 aaPredicted RBP7.52□□□□□ -1.2
SMCO1-201ENST00000397537 KCNH4Q9UQ05 1017 aa7.52□□□□□ -1.2
SMCO1-201ENST00000397537 EP400Q96L91 3159 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 CCDC66A2RUB6 948 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 SCG5P05408 212 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 ZSCAN22P10073 491 aaPredicted RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 ALOX15P16050 662 aaPredicted RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 FGFR4P22455 802 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 IL4RP24394 825 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 HADHAP40939 763 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 EVCP57679 992 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 RELBQ01201 579 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 PDE4BQ07343 736 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 SLC20A2Q08357 652 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 DLGAP5Q15398 846 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 VWA3BQ502W6 1294 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 POMZP3Q6PJE2 187 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 Q6ZVU0 165 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 CEP97Q8IW35 865 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 SLC44A2Q8IWA5 706 aaPredicted RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 CCDC144CPQ8IYA2 1237 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 PPP1R14CQ8TAE6 165 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 NSUN4Q96CB9 384 aaKnown RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 ZC3H10Q96K80 434 aaKnown RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 UROC1Q96N76 676 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 MOGAT1Q96PD6 335 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 MTRQ99707 1265 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 ZDHHC5Q9C0B5 715 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 RASSF4Q9H2L5 321 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 CCDC177Q9NQR7 707 aaPredicted RBP7.52□□□□□ -1.21
SMCO1-201ENST00000397537 PCOLCE2Q9UKZ9 415 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 TRIM33Q9UPN9 1127 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 ATP23Q9Y6H3 246 aa7.52□□□□□ -1.21
SMCO1-201ENST00000397537 FAM135AQ9P2D6 1515 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 H0Y626 953 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 SHOXO15266 292 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 ARHGAP6O43182 974 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 COBLO75128 1261 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 GUCA1CO95843 209 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 CYP17A1P05093 508 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 PTPRAP18433 802 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 CD247P20963 164 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 EEF1GP26641 437 aaKnown RBP7.51□□□□□ -1.21
SMCO1-201ENST00000397537 HOXC12P31275 282 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 ECI1P42126 302 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 CCR5P51681 352 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 CSE1LP55060 971 aaKnown RBP7.51□□□□□ -1.21
SMCO1-201ENST00000397537 CCINQ13939 588 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 TOR2AQ5JU69 321 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 ZNF697Q5TEC3 545 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 IRGCQ6NXR0 463 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 HDXQ7Z353 690 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 SLC9B2Q86UD5 537 aa7.51□□□□□ -1.21
SMCO1-201ENST00000397537 HERC6Q8IVU3 1022 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms