RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PTPN21Q16825 1174 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 CCDC40Q4G0X9 1142 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 ARMCX5Q6P1M9 558 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 SLC39A4Q6P5W5 647 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 NAP1L5Q96NT1 182 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 XPO4Q9C0E2 1151 aaKnown RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 TMEM134Q9H6X4 195 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 CDHR5Q9HBB8 845 aa23.21■■□□□ 1.31
CPNE1-204ENST00000397443 TRMT13Q9NUP7 481 aaKnown RBP23.21■■□□□ 1.31
CPNE1-204ENST00000397443 IQCF3P0C7M6 154 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 RPL13P26373 211 aaKnown RBP23.2■■□□□ 1.3
CPNE1-204ENST00000397443 MTIF2P46199 727 aaKnown RBP23.2■■□□□ 1.3
CPNE1-204ENST00000397443 UBASH3AP57075 661 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 TMEM132AQ24JP5 1023 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 SARM1Q6SZW1 724 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 FAM114A1Q8IWE2 563 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 RDH13Q8NBN7 331 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 ANKRD20A12PQ8NF67 263 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 GOLGA5Q8TBA6 731 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 CCDC113Q9H0I3 377 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 VPS16Q9H269 839 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 NOD1Q9Y239 953 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 ABCD1P33897 745 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 MATR3P43243 847 aaKnown RBP eCLIP23.2■■□□□ 1.3
CPNE1-204ENST00000397443 ZNF75DP51815 510 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 MBTD1Q05BQ5 628 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 PKN2Q16513 984 aaKnown RBP23.2■■□□□ 1.3
CPNE1-204ENST00000397443 FOXR2Q6PJQ5 311 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 ZSWIM2Q8NEG5 633 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 WNT8BQ93098 351 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 CEP63Q96MT8 703 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 OSMRQ99650 979 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 ANKFY1Q9P2R3 1169 aa23.2■■□□□ 1.3
CPNE1-204ENST00000397443 DNM1LO00429 736 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 B4GALT5O43286 388 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 AKAP3O75969 853 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 TFRCP02786 760 aaKnown RBP23.19■■□□□ 1.3
CPNE1-204ENST00000397443 PRKCSHP14314 528 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-204ENST00000397443 FGFR4P22455 802 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 ADSSP30520 456 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 SPAG1Q07617 926 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 U2AF1L4Q8WU68 220 aaKnown RBP23.19■■□□□ 1.3
CPNE1-204ENST00000397443 POMGNT1Q8WZA1 660 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 SAAL1Q96ER3 474 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 ZBTB45Q96K62 511 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-204ENST00000397443 ADAMTS10Q9H324 1103 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 OGDHLQ9ULD0 1010 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 PHF24Q9UPV7 400 aa23.19■■□□□ 1.3
CPNE1-204ENST00000397443 SIP14410 1827 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 KIAA0100Q14667 2235 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 GOLGA8IPA6NC78 632 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 GOLGA8JA6NMD2 632 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 EXOC3O60645 756 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 GPR32O75388 356 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 HARSP12081 509 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 EEF1GP26641 437 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 DEKP35659 375 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 TAF2Q6P1X5 1199 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 FILIP1Q7Z7B0 1213 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 HSPBP1Q9NZL4 362 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 CTSHP09668 335 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 ZNF410Q86VK4 478 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 SESTD1Q86VW0 696 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 CDR2LQ86X02 465 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 ZC3H3Q8IXZ2 948 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 CTAGE1Q96RT6 745 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 TUBGCP2Q9BSJ2 902 aa23.18■■□□□ 1.3
CPNE1-204ENST00000397443 MRPL4Q9BYD3 311 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 LIMA1Q9UHB6 759 aaKnown RBP23.18■■□□□ 1.3
CPNE1-204ENST00000397443 A0A0U1RQG5 324 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-204ENST00000397443 COPB1P53618 953 aaKnown RBP23.17■■□□□ 1.3
CPNE1-204ENST00000397443 PRPF4BQ13523 1007 aaKnown RBP23.17■■□□□ 1.3
CPNE1-204ENST00000397443 APTXQ7Z2E3 356 aaKnown RBP23.17■■□□□ 1.3
CPNE1-204ENST00000397443 SERINC5Q86VE9 423 aa23.17■■□□□ 1.3
CPNE1-204ENST00000397443 TRPV6Q9H1D0 765 aa23.17■■□□□ 1.3
CPNE1-204ENST00000397443 FRMD4BQ9Y2L6 1034 aa23.17■■□□□ 1.3
CPNE1-204ENST00000397443 SCP2P22307 547 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 POU5F1BQ06416 359 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 ZBTB33Q86T24 672 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 ARMC5Q96C12 935 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 TCHPQ9BT92 498 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 NFKBIZQ9BYH8 718 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 GCOM2Q9BZD3 368 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-204ENST00000397443 FZD8Q9H461 694 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 ACKR2O00590 384 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 N4BP3O15049 544 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 EPB41P11171 864 aaKnown RBP23.16■■□□□ 1.3
CPNE1-204ENST00000397443 FAM186BQ8IYM0 893 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 CPB2Q96IY4 423 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 NOC4LQ9BVI4 516 aaKnown RBP23.16■■□□□ 1.3
CPNE1-204ENST00000397443 SENP6Q9GZR1 1112 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-204ENST00000397443 DMAC2Q9NW81 257 aa23.16■■□□□ 1.3
CPNE1-204ENST00000397443 CGNQ9P2M7 1197 aaKnown RBP23.16■■□□□ 1.3
CPNE1-204ENST00000397443 SGPL1O95470 568 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 PSMC2P35998 433 aaKnown RBP23.15■■□□□ 1.3
CPNE1-204ENST00000397443 THPOP40225 353 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 RSPH3Q86UC2 560 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 DRC7Q8IY82 874 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 XXYLT1Q8NBI6 393 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 SPC24Q8NBT2 197 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms