RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 RHPN2Q8IUC4 686 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.61■□□□□ 0.572e-12■□□□□ 9.2
TSPAN4-205ENST00000397406 FANCLQ9NW38 375 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 GTF2IRD1Q9UHL9 959 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 CDH23Q9H251 3354 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 DENND3A2RUS2 1198 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 LRRIQ4A6NIV6 560 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TREHO43280 583 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TGFB1I1O43294 461 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 GNAT1P11488 350 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 SCP2P22307 547 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 ZNF200P98182 395 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TMEM240Q5SV17 173 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 CDCA2Q69YH5 1023 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 RUFY4Q6ZNE9 571 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TAS1R3Q7RTX0 852 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 KIAA0319LQ8IZA0 1049 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 ACCSQ96QU6 501 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 IKZF4Q9H2S9 585 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 SAMSN1Q9NSI8 373 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TYW1Q9NV66 732 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TBX20Q9UMR3 447 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 TRAF3IP3Q9Y228 551 aa18.6■□□□□ 0.57
TSPAN4-205ENST00000397406 PDXKO00764 312 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 ACRP10323 421 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 CYP2C9P11712 490 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 ZNF18P17022 549 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 ABCD1P33897 745 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 RASIP1Q5U651 963 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 CDKAL1Q5VV42 579 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 GDF6Q6KF10 455 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 MAP4K3Q8IVH8 894 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 DEPTORQ8TB45 409 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 FAM161BQ96MY7 647 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 TSG101Q99816 390 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 NOC4LQ9BVI4 516 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 TTYH1Q9H313 450 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 TMEM134Q9H6X4 195 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 TMEM206Q9H813 350 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 TRMT13Q9NUP7 481 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 AKT3Q9Y243 479 aa18.59■□□□□ 0.57
TSPAN4-205ENST00000397406 VTNP04004 478 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 POU5F1BQ06416 359 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 TFDP1Q14186 410 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 TPD52L1Q16890 204 aaPredicted RBP18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 EDRF1Q3B7T1 1238 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 ZC3H3Q8IXZ2 948 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 RNF149Q8NC42 400 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 RNPC3Q96LT9 517 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 MAP7D2Q96T17 732 aa18.58■□□□□ 0.57
TSPAN4-205ENST00000397406 PHLPP2Q6ZVD8 1323 aa18.58■□□□□ 0.56
TSPAN4-205ENST00000397406 AP5Z1O43299 807 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 GPC3P51654 580 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 PTENP60484 403 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 TPM4P67936 248 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 SMAD3P84022 425 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 NFIL3Q16649 462 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 LRRC55Q6ZSA7 311 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 IFNLR1Q8IU57 520 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 IRF2BP1Q8IU81 584 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 NLRP4Q96MN2 994 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 CTAGE1Q96RT6 745 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 NFKBIZQ9BYH8 718 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 CCDC113Q9H0I3 377 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 GBP3Q9H0R5 595 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 C2orf40Q9H1Z8 148 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 THAP9Q9H5L6 903 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 TLR3O15455 904 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 CALUO43852 315 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 ATP1A3P13637 1013 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 EFNA5P52803 228 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 PTPN11Q06124 597 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 FAM47CQ5HY64 1035 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 ZNF365Q70YC5 407 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 SYCP3Q8IZU3 236 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 NOC3LQ8WTT2 800 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 ZNF668Q96K58 619 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 FAM49AQ9H0Q0 323 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 HIPK3Q9H422 1215 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 IFT122Q9HBG6 1241 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 EXOC7Q9UPT5 735 aa18.57■□□□□ 0.56
TSPAN4-205ENST00000397406 A0A087WZ62 844 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 K7ERI5 159 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 EDN1P05305 212 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 CCL23P55773 120 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 FKBP3Q00688 224 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 HSP90AA4PQ58FG1 418 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 ZBTB8OSQ8IWT0 167 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 DNAJB3Q8WWF6 145 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 EEF2KMTQ96G04 330 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 FDXACB1Q9BRP7 624 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 AGPAT3Q9NRZ7 376 aa18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 CXXC1Q9P0U4 656 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-205ENST00000397406 STXBP5LQ9Y2K9 1186 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms