RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ACCSQ96QU6 501 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 SQORQ9Y6N5 450 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 UBE4BO95155 1302 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 ERLIN2O94905 339 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 FAM187BQ17R55 369 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 TSHZ1Q6ZSZ6 1077 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 NELFCDQ8IXH7 590 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 USP38Q8NB14 1042 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 GZF1Q9H116 711 aaPredicted RBP25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 AGO3Q9H9G7 860 aaKnown RBP25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 NR2E3Q9Y5X4 410 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 SCN5AQ14524 2016 aa25.93■■□□□ 1.74
TSPAN4-203ENST00000397397 RBAK-RBAKDNI3L0D1 243 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 KIF20AO95235 890 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 PARNO95453 639 aaKnown RBP25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 ITGB8P26012 769 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 CD52P31358 61 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 PRCPP42785 496 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 KCNA1Q09470 495 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 PAK2Q13177 524 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 PCBP1Q15365 356 aaKnown RBP eCLIP25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 PPP4R3CPQ6ZMV5 832 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 BICD1Q96G01 975 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 EXOC7Q9UPT5 735 aa25.92■■□□□ 1.74
TSPAN4-203ENST00000397397 ACKR2O00590 384 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 GPR182O15218 404 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 NBNO60934 754 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 EDN1P05305 212 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 NFX1Q12986 1120 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 PRPF4BQ13523 1007 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 STIM1Q13586 685 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 AMHR2Q16671 573 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 BMT2Q1RMZ1 405 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 TMEM132AQ24JP5 1023 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 MAP4K3Q8IVH8 894 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 SYCP3Q8IZU3 236 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 GUF1Q8N442 669 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 PRIMPOLQ96LW4 560 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 MRPL4Q9BYD3 311 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 TMEM206Q9H813 350 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 PCDH10Q9P2E7 1040 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 PADI3Q9ULW8 664 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 ST3GAL5Q9UNP4 418 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 USP20Q9Y2K6 914 aa25.91■■□□□ 1.74
TSPAN4-203ENST00000397397 B4GALT5O43286 388 aa25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 TSPAN1O60635 241 aa25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 NCBP1Q09161 790 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 GPNMBQ14956 572 aa25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 COBLL1Q53SF7 1204 aa25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 MFSD5Q6N075 450 aa25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 ERVK-5Q9HDB9 667 aa25.9■■□□□ 1.74
TSPAN4-203ENST00000397397 CD44P16070 742 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 RFC2P35250 354 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 HOXD13P35453 343 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 TYRO3Q06418 890 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 STX1AQ16623 288 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 ADSSL1Q8N142 457 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 TMEM199Q8N511 208 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 MLKLQ8NB16 471 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 TARS2Q9BW92 718 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 ZMYND8Q9ULU4 1186 aaPredicted RBP25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 CNTNAP2Q9UHC6 1331 aa25.89■■□□□ 1.74
TSPAN4-203ENST00000397397 TTLL13PA6NNM8 815 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 PPP1R3GB7ZBB8 358 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 SYN1P17600 705 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 PPP1R2P41236 205 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 KNOP1Q1ED39 458 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 DPCR1Q3MIW9 517 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 DEFB128Q7Z7B8 93 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 CPB2Q96IY4 423 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 ACO2Q99798 780 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 IFIH1Q9BYX4 1025 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 IKZF4Q9H2S9 585 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 AGPAT5Q9NUQ2 364 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 ANO10Q9NW15 660 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 HNRNPDLO14979 420 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 CCDC192P0DO97 292 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 ARF4P18085 180 aaPredicted RBP25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 AXLP30530 894 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 LIG4P49917 911 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 ATF7IP2Q5U623 682 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 KLHL10Q6JEL2 608 aa25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 PIN4Q9Y237 131 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-203ENST00000397397 ZMYM2Q9UBW7 1377 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 PIGRP01833 764 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 CXCL10P02778 98 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 ZPBP2Q6X784 338 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 SEPT8Q92599 483 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 BADQ92934 168 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 GBP3Q9H0R5 595 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 DACH1Q9UI36 760 aa25.87■■□□□ 1.73
TSPAN4-203ENST00000397397 LTBP2Q14767 1821 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 ANKRD63C9JTQ0 380 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 PSMA7O14818 248 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 CSF2RAP15509 400 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 HOXA11P31270 313 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 PLEKHG4Q58EX7 1191 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 NOTUMQ6P988 496 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 DBF4BQ8NFT6 615 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 DHTKD1Q96HY7 919 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms