RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 HELQQ8TDG4 1101 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 EVPLQ92817 2033 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 SLC5A5Q92911 643 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 TMEM169Q96HH4 297 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 CCDC136Q96JN2 1154 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 SCLT1Q96NL6 688 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 NIFKQ9BYG3 293 aaKnown RBP9.86□□□□□ -0.83
CAPN3-208ENST00000397204 INO80BQ9C086 356 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-208ENST00000397204 DZANK1Q9NVP4 752 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 MYO15AQ9UKN7 3530 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 ATG2AQ2TAZ0 1938 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 IGKV6-21A0A0C4DH24 114 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 C2CD4DB7Z1M9 353 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 EDIL3O43854 480 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 GFRA3O60609 400 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 GGCXP38435 758 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 PHKA2P46019 1235 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-208ENST00000397204 PRKCEQ02156 737 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 Q6ZUG5 572 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 DDX53Q86TM3 631 aaKnown RBP9.85□□□□□ -0.83
CAPN3-208ENST00000397204 PPFIBP1Q86W92 1011 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 PARP9Q8IXQ6 854 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 VPS52Q8N1B4 723 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 CCDC148Q8NFR7 591 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 KCNB2Q92953 911 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 BRF1Q92994 677 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 TEKT3Q9BXF9 490 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 RNF26Q9BY78 433 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-208ENST00000397204 C22orf23Q9BZE7 217 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 POMKQ9H5K3 350 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 SH3GLB2Q9NR46 395 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 STK39Q9UEW8 545 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 LIMD1Q9UGP4 676 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 LOXHD1Q8IVV2 1947 aa9.85□□□□□ -0.83
CAPN3-208ENST00000397204 FNDC1Q4ZHG4 1894 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-208ENST00000397204 MYO10Q9HD67 2058 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 GVINP1Q7Z2Y8 2422 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 CYP3A7-CYP3A51PA0A087WV96 503 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 NT5C1B-RDH14C9J2C7 533 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 H0Y858 1186 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 MAFO75444 373 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-208ENST00000397204 PSMD10O75832 226 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 BRD1O95696 1058 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 S1PR4O95977 384 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 PDGFBP01127 241 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-208ENST00000397204 GALTP07902 379 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 CTSAP10619 480 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 IFNAR1P17181 557 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 FGFR4P22455 802 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 SFPQP23246 707 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN3-208ENST00000397204 CYP3A7P24462 503 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 CLCN5P51795 746 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 NTRK3Q16288 839 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 Q4G0T1 1027 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 NOMO2Q5JPE7 1267 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 LRCH2Q5VUJ6 765 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 KIAA1841Q6NSI8 718 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 GLB1LQ6UWU2 654 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 ZNF410Q86VK4 478 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 SLC22A17Q8WUG5 538 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 IGSF21Q96ID5 467 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 ZNF668Q96K58 619 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-208ENST00000397204 CEP89Q96ST8 783 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 SPSB2Q99619 263 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 JPH2Q9BR39 696 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-208ENST00000397204 AGXT2Q9BYV1 514 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 ZBP1Q9H171 429 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 UNC45AQ9H3U1 944 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 FAM86C1Q9NVL1 165 aa9.84□□□□□ -0.83
CAPN3-208ENST00000397204 EP300Q09472 2414 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-208ENST00000397204 PLXNA4Q9HCM2 1894 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 A0A087WZ62 844 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 CHMP2AO43633 222 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 ZC3H11AO75152 810 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 CSDE1O75534 798 aaKnown RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 STBD1O95210 358 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 ALDH2P05091 517 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 SP100P23497 879 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 CA8P35219 290 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 RAB27AP51159 221 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 EVCP57679 992 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 UGCGQ16739 394 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 RARS2Q5T160 578 aaKnown RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 TWF2Q6IBS0 349 aaKnown RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 BLOC1S2Q6QNY1 142 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 B3GNT9Q6UX72 402 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 MIER3Q7Z3K6 550 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 EXOC8Q8IYI6 725 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 C12orf76Q8N812 135 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 PHKBQ93100 1093 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 ACSF2Q96CM8 615 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 PGBD4Q96DM1 585 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 SNX27Q96L92 541 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 FDXACB1Q9BRP7 624 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-208ENST00000397204 NRDE2Q9H7Z3 1164 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 CYP26B1Q9NR63 512 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 KANSL3Q9P2N6 904 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 SUCLA2Q9P2R7 463 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms